Protein–RNA interactions for Protein: P55822

SH3BGR, SH3 domain-binding glutamic acid-rich protein, humanhuman

Predicted RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BGRP55822 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.08■□□□□ 0.33
SH3BGRP55822 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SH3BGRP55822 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.08■□□□□ 0.32
SH3BGRP55822 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.08■□□□□ 0.32
SH3BGRP55822 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.08■□□□□ 0.32
SH3BGRP55822 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SH3BGRP55822 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SH3BGRP55822 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SH3BGRP55822 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SH3BGRP55822 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
SH3BGRP55822 RPS2P55-201ENST00000397318 883 ntBASIC17.08■□□□□ 0.32
SH3BGRP55822 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.08■□□□□ 0.32
SH3BGRP55822 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SH3BGRP55822 AC107956.1-201ENST00000494359 873 ntBASIC17.08■□□□□ 0.32
SH3BGRP55822 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.08■□□□□ 0.32
SH3BGRP55822 AC233702.5-201ENST00000584107 538 ntBASIC17.08■□□□□ 0.32
SH3BGRP55822 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.08■□□□□ 0.32
SH3BGRP55822 AC073195.1-201ENST00000607241 877 ntBASIC17.08■□□□□ 0.32
SH3BGRP55822 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.08■□□□□ 0.32
SH3BGRP55822 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SH3BGRP55822 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SH3BGRP55822 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.08■□□□□ 0.32
SH3BGRP55822 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SH3BGRP55822 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SH3BGRP55822 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SH3BGRP55822 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SH3BGRP55822 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
SH3BGRP55822 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.32
SH3BGRP55822 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SH3BGRP55822 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SH3BGRP55822 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SH3BGRP55822 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.07■□□□□ 0.32
SH3BGRP55822 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SH3BGRP55822 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.07■□□□□ 0.32
SH3BGRP55822 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SH3BGRP55822 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SH3BGRP55822 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SH3BGRP55822 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.07■□□□□ 0.32
SH3BGRP55822 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SH3BGRP55822 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.07■□□□□ 0.32
SH3BGRP55822 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.07■□□□□ 0.32
SH3BGRP55822 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SH3BGRP55822 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.07■□□□□ 0.32
SH3BGRP55822 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.07■□□□□ 0.32
SH3BGRP55822 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.07■□□□□ 0.32
SH3BGRP55822 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.07■□□□□ 0.32
SH3BGRP55822 AL445675.2-201ENST00000620291 557 ntBASIC17.07■□□□□ 0.32
SH3BGRP55822 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SH3BGRP55822 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.07■□□□□ 0.32
SH3BGRP55822 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SH3BGRP55822 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.07■□□□□ 0.32
SH3BGRP55822 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SH3BGRP55822 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.07■□□□□ 0.32
SH3BGRP55822 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SH3BGRP55822 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.07■□□□□ 0.32
SH3BGRP55822 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SH3BGRP55822 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.07■□□□□ 0.32
SH3BGRP55822 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SH3BGRP55822 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SH3BGRP55822 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
SH3BGRP55822 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SH3BGRP55822 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
SH3BGRP55822 FLJ13224-201ENST00000313737 1514 ntBASIC17.06■□□□□ 0.32
SH3BGRP55822 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SH3BGRP55822 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SH3BGRP55822 UBALD1-205ENST00000590891 2641 ntBASIC17.06■□□□□ 0.32
SH3BGRP55822 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SH3BGRP55822 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SH3BGRP55822 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.06■□□□□ 0.32
SH3BGRP55822 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SH3BGRP55822 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.06■□□□□ 0.32
SH3BGRP55822 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SH3BGRP55822 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.06■□□□□ 0.32
SH3BGRP55822 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SH3BGRP55822 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SH3BGRP55822 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SH3BGRP55822 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SH3BGRP55822 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SH3BGRP55822 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SH3BGRP55822 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SH3BGRP55822 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SH3BGRP55822 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.06■□□□□ 0.32
SH3BGRP55822 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SH3BGRP55822 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.06■□□□□ 0.32
SH3BGRP55822 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.06■□□□□ 0.32
SH3BGRP55822 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.06■□□□□ 0.32
SH3BGRP55822 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
SH3BGRP55822 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.06■□□□□ 0.32
SH3BGRP55822 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SH3BGRP55822 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
SH3BGRP55822 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.06■□□□□ 0.32
SH3BGRP55822 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SH3BGRP55822 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SH3BGRP55822 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SH3BGRP55822 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SH3BGRP55822 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SH3BGRP55822 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SH3BGRP55822 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SH3BGRP55822 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SH3BGRP55822 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms