Protein–RNA interactions for Protein: P55773

CCL23, C-C motif chemokine 23, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL23P55773 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CCL23P55773 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.31■□□□□ 0.68
CCL23P55773 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.31■□□□□ 0.68
CCL23P55773 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.31■□□□□ 0.68
CCL23P55773 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.31■□□□□ 0.68
CCL23P55773 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.31■□□□□ 0.68
CCL23P55773 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.31■□□□□ 0.68
CCL23P55773 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCL23P55773 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCL23P55773 AL049757.1-201ENST00000616842 1596 ntBASIC19.31■□□□□ 0.68
CCL23P55773 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.31■□□□□ 0.68
CCL23P55773 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.31■□□□□ 0.68
CCL23P55773 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCL23P55773 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCL23P55773 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.3■□□□□ 0.68
CCL23P55773 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCL23P55773 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCL23P55773 BCAR1-209ENST00000546196 1340 ntBASIC19.3■□□□□ 0.68
CCL23P55773 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CCL23P55773 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCL23P55773 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CCL23P55773 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCL23P55773 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.3■□□□□ 0.68
CCL23P55773 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCL23P55773 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCL23P55773 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.3■□□□□ 0.68
CCL23P55773 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CCL23P55773 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.3■□□□□ 0.68
CCL23P55773 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.3■□□□□ 0.68
CCL23P55773 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCL23P55773 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
CCL23P55773 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCL23P55773 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCL23P55773 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCL23P55773 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCL23P55773 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCL23P55773 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
CCL23P55773 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.3■□□□□ 0.68
CCL23P55773 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCL23P55773 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCL23P55773 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CCL23P55773 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCL23P55773 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCL23P55773 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCL23P55773 AC116562.4-201ENST00000641316 2276 ntBASIC19.29■□□□□ 0.68
CCL23P55773 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCL23P55773 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.29■□□□□ 0.68
CCL23P55773 KLF4P1-201ENST00000412782 1185 ntBASIC19.29■□□□□ 0.68
CCL23P55773 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCL23P55773 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.29■□□□□ 0.68
CCL23P55773 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.29■□□□□ 0.68
CCL23P55773 PDPK2P-202ENST00000562415 1191 ntBASIC19.29■□□□□ 0.68
CCL23P55773 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCL23P55773 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.29■□□□□ 0.68
CCL23P55773 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCL23P55773 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.29■□□□□ 0.68
CCL23P55773 AC010507.1-201ENST00000633895 436 ntBASIC19.29■□□□□ 0.68
CCL23P55773 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCL23P55773 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCL23P55773 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.29■□□□□ 0.68
CCL23P55773 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCL23P55773 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.29■□□□□ 0.68
CCL23P55773 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCL23P55773 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.29■□□□□ 0.68
CCL23P55773 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCL23P55773 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCL23P55773 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCL23P55773 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCL23P55773 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCL23P55773 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.28■□□□□ 0.68
CCL23P55773 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCL23P55773 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.28■□□□□ 0.68
CCL23P55773 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCL23P55773 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CCL23P55773 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCL23P55773 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.28■□□□□ 0.68
CCL23P55773 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CCL23P55773 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CCL23P55773 AL035633.1-201ENST00000406139 838 ntBASIC19.28■□□□□ 0.68
CCL23P55773 TSEN15P1-201ENST00000423257 515 ntBASIC19.28■□□□□ 0.68
CCL23P55773 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.28■□□□□ 0.68
CCL23P55773 SIGLEC30P-201ENST00000455569 941 ntBASIC19.28■□□□□ 0.68
CCL23P55773 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.28■□□□□ 0.68
CCL23P55773 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC19.28■□□□□ 0.68
CCL23P55773 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCL23P55773 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCL23P55773 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCL23P55773 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
CCL23P55773 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCL23P55773 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCL23P55773 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCL23P55773 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
CCL23P55773 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.27■□□□□ 0.68
CCL23P55773 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CCL23P55773 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.27■□□□□ 0.68
CCL23P55773 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.27■□□□□ 0.68
CCL23P55773 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCL23P55773 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.27■□□□□ 0.68
CCL23P55773 PHGDH-209ENST00000641074 1780 ntBASIC19.27■□□□□ 0.68
CCL23P55773 AC126763.1-201ENST00000552015 2118 ntBASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms