Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.63■□□□□ 0.73
PMS1P54277 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.63■□□□□ 0.73
PMS1P54277 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PMS1P54277 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PMS1P54277 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.63■□□□□ 0.73
PMS1P54277 FAM8A6P-201ENST00000407496 1135 ntBASIC19.63■□□□□ 0.73
PMS1P54277 TSPY12P-201ENST00000421279 868 ntBASIC19.63■□□□□ 0.73
PMS1P54277 HOMER2P1-201ENST00000455653 964 ntBASIC19.63■□□□□ 0.73
PMS1P54277 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.63■□□□□ 0.73
PMS1P54277 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
PMS1P54277 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
PMS1P54277 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.63■□□□□ 0.73
PMS1P54277 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.63■□□□□ 0.73
PMS1P54277 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PMS1P54277 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.63■□□□□ 0.73
PMS1P54277 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.63■□□□□ 0.73
PMS1P54277 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.63■□□□□ 0.73
PMS1P54277 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PMS1P54277 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PMS1P54277 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
PMS1P54277 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19.63■□□□□ 0.73
PMS1P54277 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PMS1P54277 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PMS1P54277 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
PMS1P54277 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PMS1P54277 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PMS1P54277 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PMS1P54277 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PMS1P54277 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.62■□□□□ 0.73
PMS1P54277 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PMS1P54277 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
PMS1P54277 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PMS1P54277 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.62■□□□□ 0.73
PMS1P54277 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PMS1P54277 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.62■□□□□ 0.73
PMS1P54277 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PMS1P54277 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.62■□□□□ 0.73
PMS1P54277 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.62■□□□□ 0.73
PMS1P54277 RCN1P1-201ENST00000400413 996 ntBASIC19.62■□□□□ 0.73
PMS1P54277 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.62■□□□□ 0.73
PMS1P54277 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.62■□□□□ 0.73
PMS1P54277 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.62■□□□□ 0.73
PMS1P54277 ZNF444P1-201ENST00000559497 298 ntBASIC19.62■□□□□ 0.73
PMS1P54277 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.62■□□□□ 0.73
PMS1P54277 AC005332.3-201ENST00000589904 676 ntBASIC19.62■□□□□ 0.73
PMS1P54277 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.62■□□□□ 0.73
PMS1P54277 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.62■□□□□ 0.73
PMS1P54277 AC083849.1-201ENST00000615227 514 ntBASIC19.62■□□□□ 0.73
PMS1P54277 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.62■□□□□ 0.73
PMS1P54277 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PMS1P54277 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PMS1P54277 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PMS1P54277 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PMS1P54277 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PMS1P54277 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PMS1P54277 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PMS1P54277 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PMS1P54277 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PMS1P54277 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PMS1P54277 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PMS1P54277 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PMS1P54277 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.62■□□□□ 0.73
PMS1P54277 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PMS1P54277 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PMS1P54277 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PMS1P54277 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PMS1P54277 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PMS1P54277 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.61■□□□□ 0.73
PMS1P54277 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PMS1P54277 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PMS1P54277 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PMS1P54277 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.61■□□□□ 0.73
PMS1P54277 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.61■□□□□ 0.73
PMS1P54277 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
PMS1P54277 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.61■□□□□ 0.73
PMS1P54277 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.61■□□□□ 0.73
PMS1P54277 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PMS1P54277 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PMS1P54277 AC068472.1-201ENST00000474589 881 ntBASIC19.61■□□□□ 0.73
PMS1P54277 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PMS1P54277 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.61■□□□□ 0.73
PMS1P54277 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
PMS1P54277 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PMS1P54277 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PMS1P54277 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PMS1P54277 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PMS1P54277 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PMS1P54277 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PMS1P54277 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.61■□□□□ 0.73
PMS1P54277 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PMS1P54277 AP001094.4-201ENST00000579008 2176 ntBASIC19.61■□□□□ 0.73
PMS1P54277 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
PMS1P54277 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PMS1P54277 AC022211.2-201ENST00000585075 2527 ntBASIC19.61■□□□□ 0.73
PMS1P54277 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.61■□□□□ 0.73
PMS1P54277 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PMS1P54277 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PMS1P54277 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PMS1P54277 LINC01311-201ENST00000565162 1445 ntBASIC19.6■□□□□ 0.73
PMS1P54277 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms