Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC25.36■■□□□ 1.65
CLTCL1P53675 AL353135.1-201ENST00000606729 504 ntBASIC25.36■■□□□ 1.65
CLTCL1P53675 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
CLTCL1P53675 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC25.36■■□□□ 1.65
CLTCL1P53675 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
CLTCL1P53675 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CLTCL1P53675 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CLTCL1P53675 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CLTCL1P53675 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CLTCL1P53675 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC25.35■■□□□ 1.65
CLTCL1P53675 RPS8P6-201ENST00000426177 609 ntBASIC25.35■■□□□ 1.65
CLTCL1P53675 SIGLEC30P-201ENST00000455569 941 ntBASIC25.35■■□□□ 1.65
CLTCL1P53675 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC25.35■■□□□ 1.65
CLTCL1P53675 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CLTCL1P53675 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CLTCL1P53675 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CLTCL1P53675 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC25.35■■□□□ 1.65
CLTCL1P53675 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
CLTCL1P53675 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
CLTCL1P53675 SLC4A1APP2-201ENST00000424054 1259 ntBASIC25.34■■□□□ 1.65
CLTCL1P53675 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC25.34■■□□□ 1.65
CLTCL1P53675 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC25.34■■□□□ 1.65
CLTCL1P53675 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC25.34■■□□□ 1.65
CLTCL1P53675 AL078644.1-201ENST00000609881 752 ntBASIC25.34■■□□□ 1.65
CLTCL1P53675 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CLTCL1P53675 REXO1L9P-201ENST00000604264 2108 ntBASIC25.34■■□□□ 1.65
CLTCL1P53675 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CLTCL1P53675 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CLTCL1P53675 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CLTCL1P53675 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC25.34■■□□□ 1.65
CLTCL1P53675 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC25.34■■□□□ 1.65
CLTCL1P53675 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC25.34■■□□□ 1.65
CLTCL1P53675 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
CLTCL1P53675 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CLTCL1P53675 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC25.34■■□□□ 1.65
CLTCL1P53675 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC25.34■■□□□ 1.65
CLTCL1P53675 OR7E47P-204ENST00000575924 449 ntBASIC25.34■■□□□ 1.65
CLTCL1P53675 MTDHP5-201ENST00000598980 586 ntBASIC25.34■■□□□ 1.65
CLTCL1P53675 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CLTCL1P53675 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
CLTCL1P53675 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CLTCL1P53675 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CLTCL1P53675 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CLTCL1P53675 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC25.33■■□□□ 1.65
CLTCL1P53675 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.65
CLTCL1P53675 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CLTCL1P53675 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CLTCL1P53675 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC25.33■■□□□ 1.65
CLTCL1P53675 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CLTCL1P53675 MRPL20P1-201ENST00000400819 433 ntBASIC25.33■■□□□ 1.65
CLTCL1P53675 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
CLTCL1P53675 ACTG1P4-201ENST00000425123 1122 ntBASIC25.33■■□□□ 1.65
CLTCL1P53675 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC25.33■■□□□ 1.65
CLTCL1P53675 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC25.33■■□□□ 1.65
CLTCL1P53675 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC25.33■■□□□ 1.65
CLTCL1P53675 AC004790.2-201ENST00000623588 572 ntBASIC25.33■■□□□ 1.65
CLTCL1P53675 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
CLTCL1P53675 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CLTCL1P53675 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC25.32■■□□□ 1.64
CLTCL1P53675 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CLTCL1P53675 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
CLTCL1P53675 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
CLTCL1P53675 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC25.32■■□□□ 1.64
CLTCL1P53675 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CLTCL1P53675 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CLTCL1P53675 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CLTCL1P53675 AP000997.3-201ENST00000623333 2250 ntBASIC25.32■■□□□ 1.64
CLTCL1P53675 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CLTCL1P53675 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CLTCL1P53675 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC25.32■■□□□ 1.64
CLTCL1P53675 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC25.32■■□□□ 1.64
CLTCL1P53675 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
CLTCL1P53675 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CLTCL1P53675 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CLTCL1P53675 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
CLTCL1P53675 AC098818.2-201ENST00000564925 2320 ntBASIC25.32■■□□□ 1.64
CLTCL1P53675 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CLTCL1P53675 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC25.32■■□□□ 1.64
CLTCL1P53675 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC25.31■■□□□ 1.64
CLTCL1P53675 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CLTCL1P53675 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
CLTCL1P53675 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CLTCL1P53675 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CLTCL1P53675 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CLTCL1P53675 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CLTCL1P53675 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
CLTCL1P53675 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC25.31■■□□□ 1.64
CLTCL1P53675 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
CLTCL1P53675 PDPK2P-202ENST00000562415 1191 ntBASIC25.31■■□□□ 1.64
CLTCL1P53675 MIR3687-2-201ENST00000577708 61 ntBASIC25.31■■□□□ 1.64
CLTCL1P53675 AC027612.4-201ENST00000605371 583 ntBASIC25.31■■□□□ 1.64
CLTCL1P53675 MIR3687-1-201ENST00000614492 61 ntBASIC25.31■■□□□ 1.64
CLTCL1P53675 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC25.31■■□□□ 1.64
CLTCL1P53675 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC25.31■■□□□ 1.64
CLTCL1P53675 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CLTCL1P53675 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CLTCL1P53675 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC25.31■■□□□ 1.64
CLTCL1P53675 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
CLTCL1P53675 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC25.31■■□□□ 1.64
CLTCL1P53675 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC25.31■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms