Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.33■□□□□ 0.36
PDX1P52945 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.33■□□□□ 0.36
PDX1P52945 AC009154.2-201ENST00000621177 724 ntBASIC17.33■□□□□ 0.36
PDX1P52945 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDX1P52945 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDX1P52945 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDX1P52945 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
PDX1P52945 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDX1P52945 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDX1P52945 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDX1P52945 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PDX1P52945 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PDX1P52945 AC073592.3-201ENST00000625118 1834 ntBASIC17.33■□□□□ 0.36
PDX1P52945 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.33■□□□□ 0.36
PDX1P52945 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.33■□□□□ 0.36
PDX1P52945 AC007613.1-201ENST00000572811 2597 ntBASIC17.33■□□□□ 0.36
PDX1P52945 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDX1P52945 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDX1P52945 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDX1P52945 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDX1P52945 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDX1P52945 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDX1P52945 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PDX1P52945 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PDX1P52945 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PDX1P52945 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PDX1P52945 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PDX1P52945 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDX1P52945 MTCL1P1-201ENST00000446207 792 ntBASIC17.32■□□□□ 0.36
PDX1P52945 SCARNA2-201ENST00000458748 420 ntBASIC17.32■□□□□ 0.36
PDX1P52945 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDX1P52945 AC009533.2-201ENST00000543664 586 ntBASIC17.32■□□□□ 0.36
PDX1P52945 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.32■□□□□ 0.36
PDX1P52945 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.32■□□□□ 0.36
PDX1P52945 AC011467.2-201ENST00000598425 242 ntBASIC17.32■□□□□ 0.36
PDX1P52945 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
PDX1P52945 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDX1P52945 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDX1P52945 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.32■□□□□ 0.36
PDX1P52945 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDX1P52945 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.32■□□□□ 0.36
PDX1P52945 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDX1P52945 AC135050.7-201ENST00000624508 2218 ntBASIC17.32■□□□□ 0.36
PDX1P52945 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDX1P52945 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDX1P52945 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.32■□□□□ 0.36
PDX1P52945 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDX1P52945 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
PDX1P52945 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDX1P52945 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.32■□□□□ 0.36
PDX1P52945 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
PDX1P52945 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDX1P52945 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDX1P52945 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDX1P52945 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PDX1P52945 AC125634.1-201ENST00000438758 1403 ntBASIC17.31■□□□□ 0.36
PDX1P52945 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PDX1P52945 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDX1P52945 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDX1P52945 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.31■□□□□ 0.36
PDX1P52945 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDX1P52945 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.31■□□□□ 0.36
PDX1P52945 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDX1P52945 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDX1P52945 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.31■□□□□ 0.36
PDX1P52945 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.31■□□□□ 0.36
PDX1P52945 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.31■□□□□ 0.36
PDX1P52945 RPL13AP23-201ENST00000480739 586 ntBASIC17.31■□□□□ 0.36
PDX1P52945 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.31■□□□□ 0.36
PDX1P52945 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.31■□□□□ 0.36
PDX1P52945 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDX1P52945 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.31■□□□□ 0.36
PDX1P52945 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.31■□□□□ 0.36
PDX1P52945 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.31■□□□□ 0.36
PDX1P52945 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PDX1P52945 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.31■□□□□ 0.36
PDX1P52945 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PDX1P52945 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.31■□□□□ 0.36
PDX1P52945 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDX1P52945 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.31■□□□□ 0.36
PDX1P52945 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PDX1P52945 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDX1P52945 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
PDX1P52945 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDX1P52945 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.3■□□□□ 0.36
PDX1P52945 LINC00602-201ENST00000629776 2065 ntBASIC17.3■□□□□ 0.36
PDX1P52945 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDX1P52945 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.3■□□□□ 0.36
PDX1P52945 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDX1P52945 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDX1P52945 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDX1P52945 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PDX1P52945 LINC01126-201ENST00000623515 1646 ntBASIC17.3■□□□□ 0.36
PDX1P52945 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.3■□□□□ 0.36
PDX1P52945 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.3■□□□□ 0.36
PDX1P52945 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.3■□□□□ 0.36
PDX1P52945 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.3■□□□□ 0.36
PDX1P52945 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.3■□□□□ 0.36
PDX1P52945 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.3■□□□□ 0.36
PDX1P52945 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms