Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 AC108751.1-201ENST00000490852 363 ntBASIC18.71■□□□□ 0.59
CLCN4P51793 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CLCN4P51793 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.71■□□□□ 0.59
CLCN4P51793 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.71■□□□□ 0.59
CLCN4P51793 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.71■□□□□ 0.59
CLCN4P51793 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.71■□□□□ 0.59
CLCN4P51793 AC073592.5-201ENST00000624854 528 ntBASIC18.71■□□□□ 0.59
CLCN4P51793 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CLCN4P51793 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLCN4P51793 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLCN4P51793 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CLCN4P51793 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLCN4P51793 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLCN4P51793 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.71■□□□□ 0.59
CLCN4P51793 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLCN4P51793 AC126763.1-201ENST00000552015 2118 ntBASIC18.71■□□□□ 0.59
CLCN4P51793 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLCN4P51793 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLCN4P51793 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.71■□□□□ 0.59
CLCN4P51793 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CLCN4P51793 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLCN4P51793 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.7■□□□□ 0.58
CLCN4P51793 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLCN4P51793 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLCN4P51793 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CLCN4P51793 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLCN4P51793 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.7■□□□□ 0.58
CLCN4P51793 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLCN4P51793 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLCN4P51793 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.7■□□□□ 0.58
CLCN4P51793 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLCN4P51793 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.7■□□□□ 0.58
CLCN4P51793 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.7■□□□□ 0.58
CLCN4P51793 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLCN4P51793 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.7■□□□□ 0.58
CLCN4P51793 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLCN4P51793 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLCN4P51793 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CLCN4P51793 MTDHP5-201ENST00000598980 586 ntBASIC18.7■□□□□ 0.58
CLCN4P51793 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLCN4P51793 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.7■□□□□ 0.58
CLCN4P51793 AL589182.2-201ENST00000619332 1049 ntBASIC18.7■□□□□ 0.58
CLCN4P51793 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLCN4P51793 PHGDH-209ENST00000641074 1780 ntBASIC18.7■□□□□ 0.58
CLCN4P51793 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLCN4P51793 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CLCN4P51793 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLCN4P51793 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.7■□□□□ 0.58
CLCN4P51793 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CLCN4P51793 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLCN4P51793 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLCN4P51793 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.69■□□□□ 0.58
CLCN4P51793 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLCN4P51793 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.69■□□□□ 0.58
CLCN4P51793 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLCN4P51793 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CLCN4P51793 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CLCN4P51793 COX5BP2-201ENST00000392354 334 ntBASIC18.69■□□□□ 0.58
CLCN4P51793 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.69■□□□□ 0.58
CLCN4P51793 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.69■□□□□ 0.58
CLCN4P51793 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.69■□□□□ 0.58
CLCN4P51793 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.69■□□□□ 0.58
CLCN4P51793 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLCN4P51793 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.69■□□□□ 0.58
CLCN4P51793 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CLCN4P51793 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLCN4P51793 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLCN4P51793 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.69■□□□□ 0.58
CLCN4P51793 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CLCN4P51793 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CLCN4P51793 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLCN4P51793 AC120498.9-201ENST00000339021 3867 ntBASIC18.69■□□□□ 0.58
CLCN4P51793 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLCN4P51793 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCN4P51793 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLCN4P51793 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCN4P51793 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CLCN4P51793 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.68■□□□□ 0.58
CLCN4P51793 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCN4P51793 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCN4P51793 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.68■□□□□ 0.58
CLCN4P51793 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCN4P51793 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.68■□□□□ 0.58
CLCN4P51793 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCN4P51793 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCN4P51793 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCN4P51793 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CLCN4P51793 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.68■□□□□ 0.58
CLCN4P51793 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.68■□□□□ 0.58
CLCN4P51793 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CLCN4P51793 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.68■□□□□ 0.58
CLCN4P51793 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLCN4P51793 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.68■□□□□ 0.58
CLCN4P51793 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.68■□□□□ 0.58
CLCN4P51793 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLCN4P51793 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.68■□□□□ 0.58
CLCN4P51793 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCN4P51793 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCN4P51793 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CLCN4P51793 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms