Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDE6CP51160 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDE6CP51160 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.3■□□□□ 0.68
PDE6CP51160 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.3■□□□□ 0.68
PDE6CP51160 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDE6CP51160 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.3■□□□□ 0.68
PDE6CP51160 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
PDE6CP51160 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PDE6CP51160 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDE6CP51160 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.3■□□□□ 0.68
PDE6CP51160 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDE6CP51160 TSSC2-201ENST00000450217 709 ntBASIC19.3■□□□□ 0.68
PDE6CP51160 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.3■□□□□ 0.68
PDE6CP51160 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.3■□□□□ 0.68
PDE6CP51160 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
PDE6CP51160 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.3■□□□□ 0.68
PDE6CP51160 AC024563.2-201ENST00000603282 481 ntBASIC19.3■□□□□ 0.68
PDE6CP51160 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.3■□□□□ 0.68
PDE6CP51160 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.3■□□□□ 0.68
PDE6CP51160 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDE6CP51160 LINC00167-201ENST00000530583 1419 ntBASIC19.3■□□□□ 0.68
PDE6CP51160 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDE6CP51160 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDE6CP51160 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDE6CP51160 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.3■□□□□ 0.68
PDE6CP51160 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDE6CP51160 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PDE6CP51160 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.29■□□□□ 0.68
PDE6CP51160 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.29■□□□□ 0.68
PDE6CP51160 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDE6CP51160 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDE6CP51160 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PDE6CP51160 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PDE6CP51160 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDE6CP51160 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDE6CP51160 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDE6CP51160 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDE6CP51160 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDE6CP51160 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.29■□□□□ 0.68
PDE6CP51160 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.29■□□□□ 0.68
PDE6CP51160 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDE6CP51160 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDE6CP51160 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDE6CP51160 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDE6CP51160 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PDE6CP51160 AC113404.2-201ENST00000507884 177 ntBASIC19.29■□□□□ 0.68
PDE6CP51160 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.29■□□□□ 0.68
PDE6CP51160 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PDE6CP51160 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDE6CP51160 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.29■□□□□ 0.68
PDE6CP51160 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDE6CP51160 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PDE6CP51160 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PDE6CP51160 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDE6CP51160 LINC00602-201ENST00000629776 2065 ntBASIC19.29■□□□□ 0.68
PDE6CP51160 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
PDE6CP51160 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDE6CP51160 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.29■□□□□ 0.68
PDE6CP51160 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDE6CP51160 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDE6CP51160 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDE6CP51160 KRT89P-201ENST00000620027 1478 ntBASIC19.28■□□□□ 0.68
PDE6CP51160 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PDE6CP51160 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PDE6CP51160 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.28■□□□□ 0.68
PDE6CP51160 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.28■□□□□ 0.68
PDE6CP51160 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDE6CP51160 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDE6CP51160 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDE6CP51160 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDE6CP51160 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDE6CP51160 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.28■□□□□ 0.68
PDE6CP51160 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDE6CP51160 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDE6CP51160 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDE6CP51160 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDE6CP51160 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.28■□□□□ 0.68
PDE6CP51160 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.28■□□□□ 0.68
PDE6CP51160 KRT126P-201ENST00000549467 1181 ntBASIC19.28■□□□□ 0.68
PDE6CP51160 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.28■□□□□ 0.68
PDE6CP51160 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDE6CP51160 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.28■□□□□ 0.68
PDE6CP51160 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.28■□□□□ 0.68
PDE6CP51160 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDE6CP51160 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDE6CP51160 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDE6CP51160 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PDE6CP51160 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDE6CP51160 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.28■□□□□ 0.68
PDE6CP51160 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PDE6CP51160 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
PDE6CP51160 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.28■□□□□ 0.68
PDE6CP51160 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.28■□□□□ 0.68
PDE6CP51160 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PDE6CP51160 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDE6CP51160 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDE6CP51160 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
PDE6CP51160 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.27■□□□□ 0.68
PDE6CP51160 AC012317.2-201ENST00000623305 2251 ntBASIC19.27■□□□□ 0.68
PDE6CP51160 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms