Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TUBP50607 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TUBP50607 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TUBP50607 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TUBP50607 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TUBP50607 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TUBP50607 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.79■□□□□ 0.6
TUBP50607 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TUBP50607 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.79■□□□□ 0.6
TUBP50607 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.79■□□□□ 0.6
TUBP50607 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.79■□□□□ 0.6
TUBP50607 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.79■□□□□ 0.6
TUBP50607 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.79■□□□□ 0.6
TUBP50607 AC005336.2-201ENST00000593183 939 ntBASIC18.79■□□□□ 0.6
TUBP50607 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TUBP50607 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TUBP50607 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TUBP50607 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.79■□□□□ 0.6
TUBP50607 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.79■□□□□ 0.6
TUBP50607 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TUBP50607 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TUBP50607 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TUBP50607 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.79■□□□□ 0.6
TUBP50607 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TUBP50607 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
TUBP50607 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TUBP50607 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.78■□□□□ 0.6
TUBP50607 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
TUBP50607 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TUBP50607 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TUBP50607 AC093677.2-201ENST00000600169 1863 ntBASIC18.78■□□□□ 0.6
TUBP50607 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.78■□□□□ 0.6
TUBP50607 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TUBP50607 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TUBP50607 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TUBP50607 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TUBP50607 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TUBP50607 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TUBP50607 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TUBP50607 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.78■□□□□ 0.6
TUBP50607 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
TUBP50607 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.78■□□□□ 0.6
TUBP50607 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TUBP50607 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.78■□□□□ 0.6
TUBP50607 AC114341.1-201ENST00000618070 349 ntBASIC18.78■□□□□ 0.6
TUBP50607 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TUBP50607 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.78■□□□□ 0.6
TUBP50607 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TUBP50607 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TUBP50607 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TUBP50607 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TUBP50607 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TUBP50607 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TUBP50607 PHGDH-209ENST00000641074 1780 ntBASIC18.78■□□□□ 0.6
TUBP50607 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.78■□□□□ 0.6
TUBP50607 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TUBP50607 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TUBP50607 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
TUBP50607 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
TUBP50607 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
TUBP50607 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TUBP50607 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
TUBP50607 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.77■□□□□ 0.6
TUBP50607 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TUBP50607 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TUBP50607 AC132938.6-201ENST00000623828 1655 ntBASIC18.77■□□□□ 0.6
TUBP50607 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TUBP50607 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TUBP50607 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.77■□□□□ 0.6
TUBP50607 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.77■□□□□ 0.6
TUBP50607 AL138831.2-201ENST00000606564 490 ntBASIC18.77■□□□□ 0.6
TUBP50607 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
TUBP50607 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.77■□□□□ 0.6
TUBP50607 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.77■□□□□ 0.6
TUBP50607 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
TUBP50607 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.77■□□□□ 0.6
TUBP50607 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TUBP50607 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
TUBP50607 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TUBP50607 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TUBP50607 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TUBP50607 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TUBP50607 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TUBP50607 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.77■□□□□ 0.6
TUBP50607 AC093010.1-201ENST00000473625 1624 ntBASIC18.77■□□□□ 0.6
TUBP50607 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TUBP50607 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TUBP50607 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
TUBP50607 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.77■□□□□ 0.59
TUBP50607 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TUBP50607 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
TUBP50607 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
TUBP50607 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TUBP50607 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TUBP50607 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
TUBP50607 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TUBP50607 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TUBP50607 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TUBP50607 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TUBP50607 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms