Protein–RNA interactions for Protein: P48067

SLC6A9, Sodium- and chloride-dependent glycine transporter 1, humanhuman

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A9P48067 AL157888.1-201ENST00000631930 593 ntBASIC15.82■□□□□ 0.12
SLC6A9P48067 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC6A9P48067 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC6A9P48067 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SLC6A9P48067 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC6A9P48067 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC6A9P48067 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC6A9P48067 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC6A9P48067 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC6A9P48067 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC6A9P48067 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC6A9P48067 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.82■□□□□ 0.12
SLC6A9P48067 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.82■□□□□ 0.12
SLC6A9P48067 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC6A9P48067 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC6A9P48067 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC6A9P48067 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A9P48067 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.81■□□□□ 0.12
SLC6A9P48067 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A9P48067 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A9P48067 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A9P48067 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A9P48067 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A9P48067 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A9P48067 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A9P48067 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SLC6A9P48067 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A9P48067 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A9P48067 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A9P48067 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SLC6A9P48067 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A9P48067 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC6A9P48067 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC6A9P48067 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SLC6A9P48067 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC6A9P48067 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.81■□□□□ 0.12
SLC6A9P48067 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.81■□□□□ 0.12
SLC6A9P48067 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A9P48067 GCSHP2-201ENST00000560971 527 ntBASIC15.81■□□□□ 0.12
SLC6A9P48067 AL049597.2-201ENST00000565575 961 ntBASIC15.81■□□□□ 0.12
SLC6A9P48067 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A9P48067 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A9P48067 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC6A9P48067 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A9P48067 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A9P48067 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A9P48067 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A9P48067 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A9P48067 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A9P48067 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A9P48067 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC6A9P48067 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A9P48067 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SLC6A9P48067 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.8■□□□□ 0.12
SLC6A9P48067 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A9P48067 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC6A9P48067 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SLC6A9P48067 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
SLC6A9P48067 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
SLC6A9P48067 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
SLC6A9P48067 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SLC6A9P48067 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC6A9P48067 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A9P48067 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A9P48067 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A9P48067 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
SLC6A9P48067 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC6A9P48067 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A9P48067 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A9P48067 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A9P48067 SLC25A6P5-201ENST00000435663 894 ntBASIC15.8■□□□□ 0.12
SLC6A9P48067 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A9P48067 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A9P48067 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SLC6A9P48067 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A9P48067 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.8■□□□□ 0.12
SLC6A9P48067 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A9P48067 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.8■□□□□ 0.12
SLC6A9P48067 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.8■□□□□ 0.12
SLC6A9P48067 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC6A9P48067 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A9P48067 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A9P48067 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A9P48067 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A9P48067 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.8■□□□□ 0.12
SLC6A9P48067 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A9P48067 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A9P48067 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
SLC6A9P48067 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
SLC6A9P48067 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.8■□□□□ 0.12
SLC6A9P48067 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC6A9P48067 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A9P48067 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
SLC6A9P48067 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC6A9P48067 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SLC6A9P48067 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
SLC6A9P48067 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SLC6A9P48067 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SLC6A9P48067 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC6A9P48067 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms