Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HTR3AP46098 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.51■□□□□ 0.23
HTR3AP46098 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.51■□□□□ 0.23
HTR3AP46098 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.51■□□□□ 0.23
HTR3AP46098 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HTR3AP46098 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HTR3AP46098 AL136038.4-201ENST00000603606 1261 ntBASIC16.51■□□□□ 0.23
HTR3AP46098 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HTR3AP46098 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HTR3AP46098 AC093010.1-201ENST00000473625 1624 ntBASIC16.51■□□□□ 0.23
HTR3AP46098 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.51■□□□□ 0.23
HTR3AP46098 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HTR3AP46098 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
HTR3AP46098 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HTR3AP46098 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HTR3AP46098 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HTR3AP46098 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HTR3AP46098 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HTR3AP46098 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HTR3AP46098 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
HTR3AP46098 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HTR3AP46098 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
HTR3AP46098 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
HTR3AP46098 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HTR3AP46098 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HTR3AP46098 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HTR3AP46098 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.5■□□□□ 0.23
HTR3AP46098 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.5■□□□□ 0.23
HTR3AP46098 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HTR3AP46098 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
HTR3AP46098 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
HTR3AP46098 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HTR3AP46098 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HTR3AP46098 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HTR3AP46098 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HTR3AP46098 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HTR3AP46098 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HTR3AP46098 AC113404.2-201ENST00000507884 177 ntBASIC16.5■□□□□ 0.23
HTR3AP46098 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.5■□□□□ 0.23
HTR3AP46098 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
HTR3AP46098 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.5■□□□□ 0.23
HTR3AP46098 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HTR3AP46098 AC024563.2-201ENST00000603282 481 ntBASIC16.5■□□□□ 0.23
HTR3AP46098 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.5■□□□□ 0.23
HTR3AP46098 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.5■□□□□ 0.23
HTR3AP46098 AC006011.2-201ENST00000621313 1158 ntBASIC16.5■□□□□ 0.23
HTR3AP46098 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HTR3AP46098 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HTR3AP46098 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HTR3AP46098 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.5■□□□□ 0.23
HTR3AP46098 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HTR3AP46098 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HTR3AP46098 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HTR3AP46098 AL391807.1-203ENST00000604392 2365 ntBASIC16.5■□□□□ 0.23
HTR3AP46098 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.5■□□□□ 0.23
HTR3AP46098 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HTR3AP46098 AC099343.3-201ENST00000605834 2503 ntBASIC16.5■□□□□ 0.23
HTR3AP46098 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
HTR3AP46098 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
HTR3AP46098 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
HTR3AP46098 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
HTR3AP46098 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
HTR3AP46098 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HTR3AP46098 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HTR3AP46098 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.49■□□□□ 0.23
HTR3AP46098 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HTR3AP46098 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
HTR3AP46098 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.49■□□□□ 0.23
HTR3AP46098 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HTR3AP46098 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HTR3AP46098 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
HTR3AP46098 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HTR3AP46098 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HTR3AP46098 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HTR3AP46098 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.49■□□□□ 0.23
HTR3AP46098 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.49■□□□□ 0.23
HTR3AP46098 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HTR3AP46098 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.49■□□□□ 0.23
HTR3AP46098 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HTR3AP46098 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.49■□□□□ 0.23
HTR3AP46098 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.49■□□□□ 0.23
HTR3AP46098 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.49■□□□□ 0.23
HTR3AP46098 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.49■□□□□ 0.23
HTR3AP46098 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.49■□□□□ 0.23
HTR3AP46098 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HTR3AP46098 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HTR3AP46098 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HTR3AP46098 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HTR3AP46098 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HTR3AP46098 AC138028.4-201ENST00000564984 1845 ntBASIC16.49■□□□□ 0.23
HTR3AP46098 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
HTR3AP46098 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HTR3AP46098 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HTR3AP46098 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HTR3AP46098 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HTR3AP46098 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HTR3AP46098 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HTR3AP46098 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HTR3AP46098 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.48■□□□□ 0.23
HTR3AP46098 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms