Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.58■□□□□ 0.56
MMP13P45452 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.58■□□□□ 0.56
MMP13P45452 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.58■□□□□ 0.56
MMP13P45452 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
MMP13P45452 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MMP13P45452 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MMP13P45452 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
MMP13P45452 AC011676.5-201ENST00000624864 2660 ntBASIC18.57■□□□□ 0.56
MMP13P45452 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
MMP13P45452 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
MMP13P45452 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MMP13P45452 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MMP13P45452 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MMP13P45452 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.57■□□□□ 0.56
MMP13P45452 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
MMP13P45452 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MMP13P45452 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MMP13P45452 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MMP13P45452 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
MMP13P45452 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.57■□□□□ 0.56
MMP13P45452 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MMP13P45452 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.57■□□□□ 0.56
MMP13P45452 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MMP13P45452 HBZP1-201ENST00000354915 429 ntBASIC18.57■□□□□ 0.56
MMP13P45452 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
MMP13P45452 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MMP13P45452 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.57■□□□□ 0.56
MMP13P45452 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.57■□□□□ 0.56
MMP13P45452 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MMP13P45452 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.57■□□□□ 0.56
MMP13P45452 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
MMP13P45452 AC008687.5-201ENST00000593746 558 ntBASIC18.57■□□□□ 0.56
MMP13P45452 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.57■□□□□ 0.56
MMP13P45452 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
MMP13P45452 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
MMP13P45452 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
MMP13P45452 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MMP13P45452 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.57■□□□□ 0.56
MMP13P45452 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MMP13P45452 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
MMP13P45452 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.57■□□□□ 0.56
MMP13P45452 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MMP13P45452 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MMP13P45452 AC090340.1-201ENST00000620778 4980 ntBASIC18.56■□□□□ 0.56
MMP13P45452 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
MMP13P45452 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MMP13P45452 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MMP13P45452 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.56■□□□□ 0.56
MMP13P45452 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MMP13P45452 AL671277.2-201ENST00000458060 996 ntBASIC18.56■□□□□ 0.56
MMP13P45452 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MMP13P45452 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.56■□□□□ 0.56
MMP13P45452 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.56■□□□□ 0.56
MMP13P45452 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.56■□□□□ 0.56
MMP13P45452 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.56■□□□□ 0.56
MMP13P45452 HYMAI.1-201ENST00000620949 238 ntBASIC18.56■□□□□ 0.56
MMP13P45452 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MMP13P45452 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.56■□□□□ 0.56
MMP13P45452 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MMP13P45452 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
MMP13P45452 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
MMP13P45452 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MMP13P45452 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
MMP13P45452 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.56■□□□□ 0.56
MMP13P45452 LINC01311-201ENST00000565162 1445 ntBASIC18.56■□□□□ 0.56
MMP13P45452 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MMP13P45452 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.56■□□□□ 0.56
MMP13P45452 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
MMP13P45452 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MMP13P45452 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MMP13P45452 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.55■□□□□ 0.56
MMP13P45452 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
MMP13P45452 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MMP13P45452 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MMP13P45452 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.55■□□□□ 0.56
MMP13P45452 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
MMP13P45452 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MMP13P45452 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MMP13P45452 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.55■□□□□ 0.56
MMP13P45452 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
MMP13P45452 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
MMP13P45452 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
MMP13P45452 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MMP13P45452 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.55■□□□□ 0.56
MMP13P45452 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.55■□□□□ 0.56
MMP13P45452 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.55■□□□□ 0.56
MMP13P45452 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.55■□□□□ 0.56
MMP13P45452 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.55■□□□□ 0.56
MMP13P45452 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MMP13P45452 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
MMP13P45452 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
MMP13P45452 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MMP13P45452 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.55■□□□□ 0.56
MMP13P45452 AL023806.1-201ENST00000603994 1649 ntBASIC18.55■□□□□ 0.56
MMP13P45452 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
MMP13P45452 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
MMP13P45452 HTR7P1-202ENST00000624664 4411 ntBASIC18.55■□□□□ 0.56
MMP13P45452 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MMP13P45452 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
MMP13P45452 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms