Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 NME2P1-201ENST00000426182 414 ntBASIC19.91■□□□□ 0.78
HTTP42858 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.91■□□□□ 0.78
HTTP42858 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.91■□□□□ 0.78
HTTP42858 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HTTP42858 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.91■□□□□ 0.78
HTTP42858 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HTTP42858 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HTTP42858 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.91■□□□□ 0.78
HTTP42858 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.91■□□□□ 0.78
HTTP42858 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.91■□□□□ 0.78
HTTP42858 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
HTTP42858 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.91■□□□□ 0.78
HTTP42858 KLF4P1-201ENST00000412782 1185 ntBASIC19.91■□□□□ 0.78
HTTP42858 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC19.91■□□□□ 0.78
HTTP42858 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.91■□□□□ 0.78
HTTP42858 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HTTP42858 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HTTP42858 MIR943-201ENST00000401286 94 ntBASIC19.9■□□□□ 0.78
HTTP42858 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HTTP42858 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.9■□□□□ 0.78
HTTP42858 AC023141.13-201ENST00000604991 943 ntBASIC19.9■□□□□ 0.78
HTTP42858 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
HTTP42858 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC19.9■□□□□ 0.78
HTTP42858 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HTTP42858 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.9■□□□□ 0.78
HTTP42858 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.9■□□□□ 0.78
HTTP42858 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC19.9■□□□□ 0.78
HTTP42858 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HTTP42858 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.9■□□□□ 0.78
HTTP42858 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.9■□□□□ 0.78
HTTP42858 AC003669.1-201ENST00000334569 611 ntBASIC19.89■□□□□ 0.78
HTTP42858 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.89■□□□□ 0.78
HTTP42858 GPS2P2-201ENST00000430745 888 ntBASIC19.89■□□□□ 0.78
HTTP42858 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC19.89■□□□□ 0.78
HTTP42858 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
HTTP42858 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
HTTP42858 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HTTP42858 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HTTP42858 SERBP1P5-201ENST00000510079 1181 ntBASIC19.89■□□□□ 0.77
HTTP42858 CR383656.12-201ENST00000549567 513 ntBASIC19.89■□□□□ 0.77
HTTP42858 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.89■□□□□ 0.77
HTTP42858 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
HTTP42858 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
HTTP42858 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
HTTP42858 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
HTTP42858 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.89■□□□□ 0.77
HTTP42858 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
HTTP42858 AC018445.3-201ENST00000624177 1945 ntBASIC19.89■□□□□ 0.77
HTTP42858 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC19.89■□□□□ 0.77
HTTP42858 AL020989.1-201ENST00000422979 469 ntBASIC19.89■□□□□ 0.77
HTTP42858 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HTTP42858 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.89■□□□□ 0.77
HTTP42858 AL596325.1-201ENST00000563991 1082 ntBASIC19.89■□□□□ 0.77
HTTP42858 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.89■□□□□ 0.77
HTTP42858 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.89■□□□□ 0.77
HTTP42858 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HTTP42858 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC19.88■□□□□ 0.77
HTTP42858 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HTTP42858 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HTTP42858 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HTTP42858 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
HTTP42858 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HTTP42858 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
HTTP42858 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HTTP42858 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HTTP42858 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HTTP42858 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
HTTP42858 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HTTP42858 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HTTP42858 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.88■□□□□ 0.77
HTTP42858 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.88■□□□□ 0.77
HTTP42858 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.88■□□□□ 0.77
HTTP42858 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HTTP42858 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HTTP42858 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HTTP42858 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC19.88■□□□□ 0.77
HTTP42858 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.88■□□□□ 0.77
HTTP42858 AL359881.2-201ENST00000602973 570 ntBASIC19.88■□□□□ 0.77
HTTP42858 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.88■□□□□ 0.77
HTTP42858 AL353593.2-201ENST00000602529 1483 ntBASIC19.88■□□□□ 0.77
HTTP42858 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HTTP42858 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HTTP42858 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HTTP42858 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HTTP42858 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HTTP42858 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HTTP42858 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
HTTP42858 KLF2P3-201ENST00000451977 1087 ntBASIC19.87■□□□□ 0.77
HTTP42858 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HTTP42858 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.87■□□□□ 0.77
HTTP42858 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.87■□□□□ 0.77
HTTP42858 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.87■□□□□ 0.77
HTTP42858 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.87■□□□□ 0.77
HTTP42858 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HTTP42858 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HTTP42858 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HTTP42858 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HTTP42858 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HTTP42858 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.87■□□□□ 0.77
HTTP42858 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms