Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.47■□□□□ 0.71
HOXD13P35453 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HOXD13P35453 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
HOXD13P35453 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
HOXD13P35453 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
HOXD13P35453 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HOXD13P35453 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXD13P35453 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXD13P35453 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HOXD13P35453 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HOXD13P35453 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.46■□□□□ 0.71
HOXD13P35453 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.46■□□□□ 0.71
HOXD13P35453 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.46■□□□□ 0.71
HOXD13P35453 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXD13P35453 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
HOXD13P35453 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXD13P35453 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXD13P35453 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXD13P35453 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HOXD13P35453 AC005104.2-201ENST00000427818 678 ntBASIC19.46■□□□□ 0.71
HOXD13P35453 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.46■□□□□ 0.71
HOXD13P35453 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HOXD13P35453 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.46■□□□□ 0.71
HOXD13P35453 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXD13P35453 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.46■□□□□ 0.71
HOXD13P35453 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.46■□□□□ 0.71
HOXD13P35453 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
HOXD13P35453 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.46■□□□□ 0.71
HOXD13P35453 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HOXD13P35453 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXD13P35453 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.46■□□□□ 0.71
HOXD13P35453 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HOXD13P35453 HLA-J-201ENST00000462773 1622 ntBASIC19.46■□□□□ 0.71
HOXD13P35453 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.46■□□□□ 0.71
HOXD13P35453 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.46■□□□□ 0.71
HOXD13P35453 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
HOXD13P35453 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
HOXD13P35453 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXD13P35453 AC020763.4-201ENST00000623414 4170 ntBASIC19.46■□□□□ 0.71
HOXD13P35453 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.46■□□□□ 0.71
HOXD13P35453 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXD13P35453 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXD13P35453 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXD13P35453 AC139713.2-201ENST00000641328 2723 ntBASIC19.45■□□□□ 0.7
HOXD13P35453 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.45■□□□□ 0.7
HOXD13P35453 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD13P35453 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.45■□□□□ 0.7
HOXD13P35453 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD13P35453 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD13P35453 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
HOXD13P35453 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD13P35453 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD13P35453 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.45■□□□□ 0.7
HOXD13P35453 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD13P35453 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
HOXD13P35453 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
HOXD13P35453 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.45■□□□□ 0.7
HOXD13P35453 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.45■□□□□ 0.7
HOXD13P35453 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.45■□□□□ 0.7
HOXD13P35453 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.45■□□□□ 0.7
HOXD13P35453 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.45■□□□□ 0.7
HOXD13P35453 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.45■□□□□ 0.7
HOXD13P35453 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.45■□□□□ 0.7
HOXD13P35453 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
HOXD13P35453 LINC01451-201ENST00000623792 534 ntBASIC19.45■□□□□ 0.7
HOXD13P35453 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.45■□□□□ 0.7
HOXD13P35453 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD13P35453 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.45■□□□□ 0.7
HOXD13P35453 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD13P35453 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
HOXD13P35453 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD13P35453 BX276092.7-203ENST00000637198 1536 ntBASIC19.45■□□□□ 0.7
HOXD13P35453 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
HOXD13P35453 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HOXD13P35453 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXD13P35453 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXD13P35453 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HOXD13P35453 AL645608.8-201ENST00000606034 2086 ntBASIC19.44■□□□□ 0.7
HOXD13P35453 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HOXD13P35453 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXD13P35453 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HOXD13P35453 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.44■□□□□ 0.7
HOXD13P35453 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXD13P35453 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXD13P35453 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXD13P35453 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.44■□□□□ 0.7
HOXD13P35453 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
HOXD13P35453 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HOXD13P35453 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXD13P35453 KRT17P6-201ENST00000453795 1220 ntBASIC19.44■□□□□ 0.7
HOXD13P35453 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.44■□□□□ 0.7
HOXD13P35453 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HOXD13P35453 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
HOXD13P35453 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.44■□□□□ 0.7
HOXD13P35453 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
HOXD13P35453 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.44■□□□□ 0.7
HOXD13P35453 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HOXD13P35453 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
HOXD13P35453 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.44■□□□□ 0.7
HOXD13P35453 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms