Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC8P31273 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.36■□□□□ 0.69
HOXC8P31273 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
HOXC8P31273 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
HOXC8P31273 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.36■□□□□ 0.69
HOXC8P31273 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
HOXC8P31273 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.36■□□□□ 0.69
HOXC8P31273 AP006288.1-201ENST00000446065 395 ntBASIC19.36■□□□□ 0.69
HOXC8P31273 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.36■□□□□ 0.69
HOXC8P31273 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.36■□□□□ 0.69
HOXC8P31273 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.36■□□□□ 0.69
HOXC8P31273 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.36■□□□□ 0.69
HOXC8P31273 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC8P31273 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.36■□□□□ 0.69
HOXC8P31273 AL353135.1-201ENST00000606729 504 ntBASIC19.36■□□□□ 0.69
HOXC8P31273 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC8P31273 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
HOXC8P31273 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC8P31273 AL138781.2-201ENST00000617896 1843 ntBASIC19.36■□□□□ 0.69
HOXC8P31273 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC8P31273 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
HOXC8P31273 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC8P31273 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC8P31273 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC8P31273 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
HOXC8P31273 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.35■□□□□ 0.69
HOXC8P31273 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
HOXC8P31273 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC8P31273 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.35■□□□□ 0.69
HOXC8P31273 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC8P31273 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
HOXC8P31273 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC8P31273 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.35■□□□□ 0.69
HOXC8P31273 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.35■□□□□ 0.69
HOXC8P31273 IGLL3P-201ENST00000412472 434 ntBASIC19.35■□□□□ 0.69
HOXC8P31273 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.35■□□□□ 0.69
HOXC8P31273 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.35■□□□□ 0.69
HOXC8P31273 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.35■□□□□ 0.69
HOXC8P31273 STK19B-204ENST00000512515 211 ntBASIC19.35■□□□□ 0.69
HOXC8P31273 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.35■□□□□ 0.69
HOXC8P31273 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.35■□□□□ 0.69
HOXC8P31273 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.35■□□□□ 0.69
HOXC8P31273 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.35■□□□□ 0.69
HOXC8P31273 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.35■□□□□ 0.69
HOXC8P31273 AC092865.6-201ENST00000642101 219 ntBASIC19.35■□□□□ 0.69
HOXC8P31273 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC8P31273 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.35■□□□□ 0.69
HOXC8P31273 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
HOXC8P31273 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
HOXC8P31273 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.35■□□□□ 0.69
HOXC8P31273 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.35■□□□□ 0.69
HOXC8P31273 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC8P31273 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC8P31273 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC8P31273 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC8P31273 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
HOXC8P31273 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.35■□□□□ 0.69
HOXC8P31273 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HOXC8P31273 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
HOXC8P31273 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.34■□□□□ 0.69
HOXC8P31273 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
HOXC8P31273 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
HOXC8P31273 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
HOXC8P31273 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HOXC8P31273 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HOXC8P31273 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HOXC8P31273 CRYGEP-201ENST00000412192 528 ntBASIC19.34■□□□□ 0.69
HOXC8P31273 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.34■□□□□ 0.69
HOXC8P31273 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.34■□□□□ 0.69
HOXC8P31273 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
HOXC8P31273 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.34■□□□□ 0.69
HOXC8P31273 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HOXC8P31273 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.34■□□□□ 0.69
HOXC8P31273 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HOXC8P31273 AC093503.3-201ENST00000624917 2352 ntBASIC19.34■□□□□ 0.69
HOXC8P31273 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
HOXC8P31273 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HOXC8P31273 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HOXC8P31273 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HOXC8P31273 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HOXC8P31273 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
HOXC8P31273 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HOXC8P31273 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
HOXC8P31273 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HOXC8P31273 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HOXC8P31273 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HOXC8P31273 IGHV3-52-201ENST00000519770 353 ntBASIC19.33■□□□□ 0.68
HOXC8P31273 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
HOXC8P31273 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.33■□□□□ 0.68
HOXC8P31273 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.33■□□□□ 0.68
HOXC8P31273 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.33■□□□□ 0.68
HOXC8P31273 AC004790.2-201ENST00000623588 572 ntBASIC19.33■□□□□ 0.68
HOXC8P31273 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HOXC8P31273 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.33■□□□□ 0.68
HOXC8P31273 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
HOXC8P31273 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.33■□□□□ 0.68
HOXC8P31273 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HOXC8P31273 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.33■□□□□ 0.68
HOXC8P31273 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HOXC8P31273 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms