Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB4AP20338 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB4AP20338 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
RAB4AP20338 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RAB4AP20338 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB4AP20338 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC13.71□□□□□ -0.21
RAB4AP20338 BET1L-204ENST00000410108 637 ntTSL 3 BASIC13.71□□□□□ -0.21
RAB4AP20338 CNN2P6-201ENST00000439038 900 ntBASIC13.71□□□□□ -0.21
RAB4AP20338 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.71□□□□□ -0.21
RAB4AP20338 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RAB4AP20338 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.71□□□□□ -0.21
RAB4AP20338 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB4AP20338 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC13.71□□□□□ -0.21
RAB4AP20338 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC13.71□□□□□ -0.21
RAB4AP20338 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB4AP20338 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB4AP20338 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RAB4AP20338 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
RAB4AP20338 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC13.71□□□□□ -0.22
RAB4AP20338 AL023806.1-201ENST00000603994 1649 ntBASIC13.71□□□□□ -0.22
RAB4AP20338 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
RAB4AP20338 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.71□□□□□ -0.22
RAB4AP20338 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
RAB4AP20338 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC13.71□□□□□ -0.22
RAB4AP20338 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RAB4AP20338 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RAB4AP20338 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RAB4AP20338 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RAB4AP20338 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
RAB4AP20338 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC13.71□□□□□ -0.22
RAB4AP20338 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
RAB4AP20338 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
RAB4AP20338 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.7□□□□□ -0.22
RAB4AP20338 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB4AP20338 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB4AP20338 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC13.7□□□□□ -0.22
RAB4AP20338 BANP-227ENST00000626016 2144 ntTSL 2 BASIC13.7□□□□□ -0.22
RAB4AP20338 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB4AP20338 KRT17P1-201ENST00000399211 1546 ntBASIC13.7□□□□□ -0.22
RAB4AP20338 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB4AP20338 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB4AP20338 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RAB4AP20338 AC105020.1-201ENST00000435356 2205 ntBASIC13.7□□□□□ -0.22
RAB4AP20338 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB4AP20338 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RAB4AP20338 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB4AP20338 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RAB4AP20338 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB4AP20338 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB4AP20338 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
RAB4AP20338 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB4AP20338 GPX1P1-201ENST00000388829 606 ntBASIC13.7□□□□□ -0.22
RAB4AP20338 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RAB4AP20338 AC005837.3-201ENST00000612163 286 ntBASIC13.7□□□□□ -0.22
RAB4AP20338 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB4AP20338 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
RAB4AP20338 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC13.7□□□□□ -0.22
RAB4AP20338 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
RAB4AP20338 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.7□□□□□ -0.22
RAB4AP20338 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
RAB4AP20338 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RAB4AP20338 AC010980.2-201ENST00000587099 1412 ntBASIC13.7□□□□□ -0.22
RAB4AP20338 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB4AP20338 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.7□□□□□ -0.22
RAB4AP20338 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB4AP20338 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC13.7□□□□□ -0.22
RAB4AP20338 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB4AP20338 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB4AP20338 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB4AP20338 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RAB4AP20338 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC13.7□□□□□ -0.22
RAB4AP20338 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.7□□□□□ -0.22
RAB4AP20338 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB4AP20338 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB4AP20338 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RAB4AP20338 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RAB4AP20338 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
RAB4AP20338 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC13.69□□□□□ -0.22
RAB4AP20338 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB4AP20338 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC13.69□□□□□ -0.22
RAB4AP20338 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RAB4AP20338 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB4AP20338 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RAB4AP20338 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC13.69□□□□□ -0.22
RAB4AP20338 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB4AP20338 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB4AP20338 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
RAB4AP20338 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB4AP20338 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB4AP20338 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB4AP20338 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
RAB4AP20338 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB4AP20338 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB4AP20338 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB4AP20338 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.69□□□□□ -0.22
RAB4AP20338 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RAB4AP20338 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC13.69□□□□□ -0.22
RAB4AP20338 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB4AP20338 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC13.69□□□□□ -0.22
RAB4AP20338 BID-214ENST00000617586 542 ntTSL 5 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms