Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ATF1P18846 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATF1P18846 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
ATF1P18846 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATF1P18846 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
ATF1P18846 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATF1P18846 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATF1P18846 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
ATF1P18846 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
ATF1P18846 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.68■□□□□ 0.1
ATF1P18846 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ATF1P18846 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATF1P18846 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
ATF1P18846 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATF1P18846 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
ATF1P18846 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.68■□□□□ 0.1
ATF1P18846 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ATF1P18846 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
ATF1P18846 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ATF1P18846 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.68■□□□□ 0.1
ATF1P18846 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ATF1P18846 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC15.68■□□□□ 0.1
ATF1P18846 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATF1P18846 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATF1P18846 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ATF1P18846 TSPY7P-201ENST00000431358 1114 ntBASIC15.68■□□□□ 0.1
ATF1P18846 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC15.68■□□□□ 0.1
ATF1P18846 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATF1P18846 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.68■□□□□ 0.1
ATF1P18846 DHDH-203ENST00000522614 776 ntTSL 5 BASIC15.68■□□□□ 0.1
ATF1P18846 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC15.68■□□□□ 0.1
ATF1P18846 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC15.68■□□□□ 0.1
ATF1P18846 AC104390.1-201ENST00000555663 520 ntBASIC15.68■□□□□ 0.1
ATF1P18846 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC15.68■□□□□ 0.1
ATF1P18846 MIR3180-4-201ENST00000582223 153 ntBASIC15.68■□□□□ 0.1
ATF1P18846 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATF1P18846 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATF1P18846 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC15.68■□□□□ 0.1
ATF1P18846 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATF1P18846 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.68■□□□□ 0.1
ATF1P18846 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
ATF1P18846 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATF1P18846 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.68■□□□□ 0.1
ATF1P18846 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.68■□□□□ 0.1
ATF1P18846 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ATF1P18846 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.68■□□□□ 0.1
ATF1P18846 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATF1P18846 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATF1P18846 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATF1P18846 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.67■□□□□ 0.1
ATF1P18846 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATF1P18846 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATF1P18846 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATF1P18846 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATF1P18846 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATF1P18846 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.67■□□□□ 0.1
ATF1P18846 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATF1P18846 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ATF1P18846 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
ATF1P18846 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATF1P18846 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ATF1P18846 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATF1P18846 AL139384.1-201ENST00000612143 3047 ntBASIC15.67■□□□□ 0.1
ATF1P18846 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ATF1P18846 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
ATF1P18846 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATF1P18846 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC15.67■□□□□ 0.1
ATF1P18846 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATF1P18846 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATF1P18846 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ATF1P18846 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ATF1P18846 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ATF1P18846 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ATF1P18846 AL390955.1-201ENST00000428694 934 ntBASIC15.67■□□□□ 0.1
ATF1P18846 AC007663.1-201ENST00000438948 1240 ntBASIC15.67■□□□□ 0.1
ATF1P18846 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
ATF1P18846 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC15.67■□□□□ 0.1
ATF1P18846 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.67■□□□□ 0.1
ATF1P18846 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ATF1P18846 C2orf69P3-201ENST00000565542 1120 ntBASIC15.67■□□□□ 0.1
ATF1P18846 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC15.67■□□□□ 0.1
ATF1P18846 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.67■□□□□ 0.1
ATF1P18846 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ATF1P18846 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
ATF1P18846 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATF1P18846 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC15.67■□□□□ 0.1
ATF1P18846 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATF1P18846 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATF1P18846 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATF1P18846 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATF1P18846 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
ATF1P18846 AC100803.2-201ENST00000562459 1963 ntBASIC15.67■□□□□ 0.1
ATF1P18846 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
ATF1P18846 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
ATF1P18846 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.67■□□□□ 0.1
ATF1P18846 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
ATF1P18846 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ATF1P18846 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ATF1P18846 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATF1P18846 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms