Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
ATP2A2P16615 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
ATP2A2P16615 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP2A2P16615 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP2A2P16615 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP2A2P16615 AL049812.1-201ENST00000432563 2267 ntBASIC19.71■□□□□ 0.75
ATP2A2P16615 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP2A2P16615 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP2A2P16615 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP2A2P16615 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.71■□□□□ 0.75
ATP2A2P16615 AC113404.2-201ENST00000507884 177 ntBASIC19.71■□□□□ 0.75
ATP2A2P16615 RNA5SP415-201ENST00000517246 115 ntBASIC19.71■□□□□ 0.75
ATP2A2P16615 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.71■□□□□ 0.75
ATP2A2P16615 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.71■□□□□ 0.75
ATP2A2P16615 OR7E14P-202ENST00000530490 1290 ntBASIC19.71■□□□□ 0.75
ATP2A2P16615 AC040169.1-201ENST00000565382 521 ntBASIC19.71■□□□□ 0.75
ATP2A2P16615 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.71■□□□□ 0.75
ATP2A2P16615 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ATP2A2P16615 AC008687.5-201ENST00000593746 558 ntBASIC19.71■□□□□ 0.75
ATP2A2P16615 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.71■□□□□ 0.75
ATP2A2P16615 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP2A2P16615 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP2A2P16615 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ATP2A2P16615 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.71■□□□□ 0.75
ATP2A2P16615 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP2A2P16615 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
ATP2A2P16615 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.71■□□□□ 0.75
ATP2A2P16615 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.71■□□□□ 0.75
ATP2A2P16615 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP2A2P16615 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP2A2P16615 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP2A2P16615 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP2A2P16615 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATP2A2P16615 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATP2A2P16615 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP2A2P16615 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP2A2P16615 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
ATP2A2P16615 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
ATP2A2P16615 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP2A2P16615 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.7■□□□□ 0.74
ATP2A2P16615 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.7■□□□□ 0.74
ATP2A2P16615 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.7■□□□□ 0.74
ATP2A2P16615 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.7■□□□□ 0.74
ATP2A2P16615 AC068472.1-201ENST00000474589 881 ntBASIC19.7■□□□□ 0.74
ATP2A2P16615 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.7■□□□□ 0.74
ATP2A2P16615 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.7■□□□□ 0.74
ATP2A2P16615 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.7■□□□□ 0.74
ATP2A2P16615 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
ATP2A2P16615 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP2A2P16615 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP2A2P16615 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP2A2P16615 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP2A2P16615 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP2A2P16615 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.7■□□□□ 0.74
ATP2A2P16615 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATP2A2P16615 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.7■□□□□ 0.74
ATP2A2P16615 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATP2A2P16615 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.7■□□□□ 0.74
ATP2A2P16615 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.7■□□□□ 0.74
ATP2A2P16615 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A2P16615 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A2P16615 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A2P16615 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A2P16615 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A2P16615 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A2P16615 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A2P16615 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A2P16615 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A2P16615 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A2P16615 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A2P16615 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.69■□□□□ 0.74
ATP2A2P16615 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A2P16615 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
ATP2A2P16615 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
ATP2A2P16615 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A2P16615 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
ATP2A2P16615 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A2P16615 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.69■□□□□ 0.74
ATP2A2P16615 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.69■□□□□ 0.74
ATP2A2P16615 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.69■□□□□ 0.74
ATP2A2P16615 AC012640.2-201ENST00000561606 901 ntBASIC19.69■□□□□ 0.74
ATP2A2P16615 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A2P16615 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A2P16615 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.69■□□□□ 0.74
ATP2A2P16615 AC134684.3-201ENST00000641758 218 ntBASIC19.69■□□□□ 0.74
ATP2A2P16615 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A2P16615 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A2P16615 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
ATP2A2P16615 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.69■□□□□ 0.74
ATP2A2P16615 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A2P16615 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
ATP2A2P16615 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A2P16615 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
ATP2A2P16615 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A2P16615 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A2P16615 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A2P16615 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A2P16615 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A2P16615 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATP2A2P16615 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms