Protein–RNA interactions for Protein: P13073

COX4I1, Cytochrome c oxidase subunit 4 isoform 1, mitochondrial, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1P13073 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COX4I1P13073 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COX4I1P13073 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COX4I1P13073 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COX4I1P13073 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.22■□□□□ 0.35
COX4I1P13073 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COX4I1P13073 REXO1L11P-201ENST00000620964 1927 ntBASIC17.22■□□□□ 0.35
COX4I1P13073 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COX4I1P13073 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COX4I1P13073 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COX4I1P13073 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.22■□□□□ 0.35
COX4I1P13073 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
COX4I1P13073 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COX4I1P13073 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.22■□□□□ 0.35
COX4I1P13073 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.22■□□□□ 0.35
COX4I1P13073 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.22■□□□□ 0.35
COX4I1P13073 RN7SL471P-201ENST00000580476 299 ntBASIC17.22■□□□□ 0.35
COX4I1P13073 AC073195.1-201ENST00000607241 877 ntBASIC17.22■□□□□ 0.35
COX4I1P13073 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.22■□□□□ 0.35
COX4I1P13073 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
COX4I1P13073 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
COX4I1P13073 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
COX4I1P13073 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COX4I1P13073 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COX4I1P13073 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
COX4I1P13073 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
COX4I1P13073 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COX4I1P13073 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.22■□□□□ 0.35
COX4I1P13073 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
COX4I1P13073 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.21■□□□□ 0.35
COX4I1P13073 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COX4I1P13073 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
COX4I1P13073 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COX4I1P13073 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
COX4I1P13073 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COX4I1P13073 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
COX4I1P13073 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COX4I1P13073 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
COX4I1P13073 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COX4I1P13073 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.21■□□□□ 0.35
COX4I1P13073 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
COX4I1P13073 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
COX4I1P13073 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.21■□□□□ 0.35
COX4I1P13073 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.21■□□□□ 0.35
COX4I1P13073 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COX4I1P13073 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
COX4I1P13073 MFAP1P1-201ENST00000442257 1255 ntBASIC17.21■□□□□ 0.35
COX4I1P13073 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.21■□□□□ 0.35
COX4I1P13073 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.21■□□□□ 0.35
COX4I1P13073 RNA5SP413-201ENST00000516373 109 ntBASIC17.21■□□□□ 0.35
COX4I1P13073 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.21■□□□□ 0.35
COX4I1P13073 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
COX4I1P13073 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COX4I1P13073 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
COX4I1P13073 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.21■□□□□ 0.35
COX4I1P13073 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
COX4I1P13073 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
COX4I1P13073 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COX4I1P13073 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COX4I1P13073 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COX4I1P13073 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.21■□□□□ 0.35
COX4I1P13073 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
COX4I1P13073 OR6D1P-203ENST00000641209 4860 ntBASIC17.21■□□□□ 0.35
COX4I1P13073 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COX4I1P13073 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.21■□□□□ 0.34
COX4I1P13073 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
COX4I1P13073 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
COX4I1P13073 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.21■□□□□ 0.34
COX4I1P13073 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
COX4I1P13073 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
COX4I1P13073 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.34
COX4I1P13073 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COX4I1P13073 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COX4I1P13073 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COX4I1P13073 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.2■□□□□ 0.34
COX4I1P13073 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
COX4I1P13073 AC060834.1-201ENST00000443027 2032 ntBASIC17.2■□□□□ 0.34
COX4I1P13073 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COX4I1P13073 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.2■□□□□ 0.34
COX4I1P13073 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.2■□□□□ 0.34
COX4I1P13073 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.2■□□□□ 0.34
COX4I1P13073 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.2■□□□□ 0.34
COX4I1P13073 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COX4I1P13073 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COX4I1P13073 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COX4I1P13073 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
COX4I1P13073 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COX4I1P13073 AF186192.3-201ENST00000583427 947 ntBASIC17.2■□□□□ 0.34
COX4I1P13073 AC104771.1-201ENST00000603335 964 ntBASIC17.2■□□□□ 0.34
COX4I1P13073 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.2■□□□□ 0.34
COX4I1P13073 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
COX4I1P13073 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COX4I1P13073 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COX4I1P13073 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
COX4I1P13073 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
COX4I1P13073 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COX4I1P13073 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.2■□□□□ 0.34
COX4I1P13073 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.2■□□□□ 0.34
COX4I1P13073 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.2■□□□□ 0.34
COX4I1P13073 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms