Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CLTAP09496 NSUN5P1-202ENST00000421140 1535 ntBASIC19.52■□□□□ 0.72
CLTAP09496 NSUN5P2-203ENST00000457352 1529 ntBASIC19.52■□□□□ 0.72
CLTAP09496 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CLTAP09496 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLTAP09496 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLTAP09496 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.52■□□□□ 0.72
CLTAP09496 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLTAP09496 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLTAP09496 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.52■□□□□ 0.72
CLTAP09496 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.52■□□□□ 0.72
CLTAP09496 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.52■□□□□ 0.72
CLTAP09496 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.52■□□□□ 0.72
CLTAP09496 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.52■□□□□ 0.72
CLTAP09496 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLTAP09496 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLTAP09496 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.52■□□□□ 0.72
CLTAP09496 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLTAP09496 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLTAP09496 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLTAP09496 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CLTAP09496 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
CLTAP09496 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.52■□□□□ 0.71
CLTAP09496 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
CLTAP09496 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CLTAP09496 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CLTAP09496 AC022898.2-201ENST00000616822 1312 ntBASIC19.51■□□□□ 0.71
CLTAP09496 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLTAP09496 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLTAP09496 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLTAP09496 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLTAP09496 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLTAP09496 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLTAP09496 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLTAP09496 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLTAP09496 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLTAP09496 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.51■□□□□ 0.71
CLTAP09496 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLTAP09496 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLTAP09496 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLTAP09496 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.51■□□□□ 0.71
CLTAP09496 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLTAP09496 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.51■□□□□ 0.71
CLTAP09496 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CLTAP09496 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLTAP09496 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLTAP09496 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.51■□□□□ 0.71
CLTAP09496 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.51■□□□□ 0.71
CLTAP09496 KRT126P-201ENST00000549467 1181 ntBASIC19.51■□□□□ 0.71
CLTAP09496 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLTAP09496 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.51■□□□□ 0.71
CLTAP09496 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CLTAP09496 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLTAP09496 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLTAP09496 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CLTAP09496 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.51■□□□□ 0.71
CLTAP09496 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLTAP09496 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.51■□□□□ 0.71
CLTAP09496 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.51■□□□□ 0.71
CLTAP09496 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLTAP09496 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.51■□□□□ 0.71
CLTAP09496 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLTAP09496 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.51■□□□□ 0.71
CLTAP09496 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLTAP09496 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLTAP09496 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
CLTAP09496 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLTAP09496 AC106820.2-201ENST00000563775 3264 ntBASIC19.5■□□□□ 0.71
CLTAP09496 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLTAP09496 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLTAP09496 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLTAP09496 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.5■□□□□ 0.71
CLTAP09496 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLTAP09496 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CLTAP09496 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLTAP09496 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLTAP09496 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLTAP09496 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.5■□□□□ 0.71
CLTAP09496 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CLTAP09496 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLTAP09496 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLTAP09496 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLTAP09496 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
CLTAP09496 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLTAP09496 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLTAP09496 MINOS1P3-201ENST00000457048 203 ntBASIC19.5■□□□□ 0.71
CLTAP09496 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.5■□□□□ 0.71
CLTAP09496 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.5■□□□□ 0.71
CLTAP09496 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.5■□□□□ 0.71
CLTAP09496 AC005336.2-201ENST00000593183 939 ntBASIC19.5■□□□□ 0.71
CLTAP09496 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLTAP09496 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLTAP09496 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.5■□□□□ 0.71
CLTAP09496 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLTAP09496 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLTAP09496 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLTAP09496 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLTAP09496 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLTAP09496 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLTAP09496 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms