Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
MMP2P08253 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
MMP2P08253 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MMP2P08253 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
MMP2P08253 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.96■□□□□ 0.46
MMP2P08253 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.46
MMP2P08253 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MMP2P08253 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MMP2P08253 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MMP2P08253 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
MMP2P08253 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
MMP2P08253 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
MMP2P08253 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MMP2P08253 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
MMP2P08253 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.95■□□□□ 0.46
MMP2P08253 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.95■□□□□ 0.46
MMP2P08253 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.95■□□□□ 0.46
MMP2P08253 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MMP2P08253 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MMP2P08253 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
MMP2P08253 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
MMP2P08253 KRT17P6-201ENST00000453795 1220 ntBASIC17.95■□□□□ 0.46
MMP2P08253 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.95■□□□□ 0.46
MMP2P08253 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MMP2P08253 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MMP2P08253 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.95■□□□□ 0.46
MMP2P08253 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MMP2P08253 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MMP2P08253 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.95■□□□□ 0.46
MMP2P08253 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
MMP2P08253 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.95■□□□□ 0.46
MMP2P08253 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MMP2P08253 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MMP2P08253 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.95■□□□□ 0.46
MMP2P08253 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
MMP2P08253 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MMP2P08253 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MMP2P08253 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MMP2P08253 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
MMP2P08253 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
MMP2P08253 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MMP2P08253 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
MMP2P08253 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MMP2P08253 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MMP2P08253 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.94■□□□□ 0.46
MMP2P08253 BX276092.7-203ENST00000637198 1536 ntBASIC17.94■□□□□ 0.46
MMP2P08253 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
MMP2P08253 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
MMP2P08253 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.94■□□□□ 0.46
MMP2P08253 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.94■□□□□ 0.46
MMP2P08253 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.94■□□□□ 0.46
MMP2P08253 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
MMP2P08253 COX5BP2-201ENST00000392354 334 ntBASIC17.94■□□□□ 0.46
MMP2P08253 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MMP2P08253 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
MMP2P08253 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.94■□□□□ 0.46
MMP2P08253 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.94■□□□□ 0.46
MMP2P08253 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.94■□□□□ 0.46
MMP2P08253 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.94■□□□□ 0.46
MMP2P08253 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.94■□□□□ 0.46
MMP2P08253 AC092329.2-201ENST00000598402 547 ntBASIC17.94■□□□□ 0.46
MMP2P08253 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.94■□□□□ 0.46
MMP2P08253 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
MMP2P08253 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MMP2P08253 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
MMP2P08253 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MMP2P08253 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.94■□□□□ 0.46
MMP2P08253 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.94■□□□□ 0.46
MMP2P08253 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
MMP2P08253 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MMP2P08253 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MMP2P08253 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MMP2P08253 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MMP2P08253 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
MMP2P08253 NSUN5P1-202ENST00000421140 1535 ntBASIC17.93■□□□□ 0.46
MMP2P08253 NSUN5P2-203ENST00000457352 1529 ntBASIC17.93■□□□□ 0.46
MMP2P08253 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MMP2P08253 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MMP2P08253 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.93■□□□□ 0.46
MMP2P08253 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
MMP2P08253 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MMP2P08253 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.93■□□□□ 0.46
MMP2P08253 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MMP2P08253 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MMP2P08253 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MMP2P08253 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MMP2P08253 VENTXP7-201ENST00000475503 772 ntBASIC17.93■□□□□ 0.46
MMP2P08253 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.93■□□□□ 0.46
MMP2P08253 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.93■□□□□ 0.46
MMP2P08253 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
MMP2P08253 Z69720.1-201ENST00000601483 472 ntBASIC17.93■□□□□ 0.46
MMP2P08253 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.93■□□□□ 0.46
MMP2P08253 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.93■□□□□ 0.46
MMP2P08253 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MMP2P08253 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
MMP2P08253 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.93■□□□□ 0.46
MMP2P08253 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MMP2P08253 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
MMP2P08253 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
MMP2P08253 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms