Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 AC142381.4-202ENST00000563973 229 ntBASIC16.2■□□□□ 0.18
HMGN1P05114 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.2■□□□□ 0.18
HMGN1P05114 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMGN1P05114 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HMGN1P05114 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMGN1P05114 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
HMGN1P05114 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMGN1P05114 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMGN1P05114 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMGN1P05114 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMGN1P05114 AC100803.2-201ENST00000562459 1963 ntBASIC16.2■□□□□ 0.18
HMGN1P05114 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HMGN1P05114 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
HMGN1P05114 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.2■□□□□ 0.18
HMGN1P05114 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMGN1P05114 HLA-J-201ENST00000462773 1622 ntBASIC16.19■□□□□ 0.18
HMGN1P05114 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.19■□□□□ 0.18
HMGN1P05114 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMGN1P05114 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.19■□□□□ 0.18
HMGN1P05114 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMGN1P05114 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HMGN1P05114 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMGN1P05114 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMGN1P05114 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMGN1P05114 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMGN1P05114 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.19■□□□□ 0.18
HMGN1P05114 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
HMGN1P05114 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMGN1P05114 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMGN1P05114 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.19■□□□□ 0.18
HMGN1P05114 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.19■□□□□ 0.18
HMGN1P05114 UNC93B2-201ENST00000285383 730 ntBASIC16.19■□□□□ 0.18
HMGN1P05114 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HMGN1P05114 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.19■□□□□ 0.18
HMGN1P05114 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HMGN1P05114 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.19■□□□□ 0.18
HMGN1P05114 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.19■□□□□ 0.18
HMGN1P05114 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.19■□□□□ 0.18
HMGN1P05114 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.19■□□□□ 0.18
HMGN1P05114 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.19■□□□□ 0.18
HMGN1P05114 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.19■□□□□ 0.18
HMGN1P05114 LINC01451-201ENST00000623792 534 ntBASIC16.19■□□□□ 0.18
HMGN1P05114 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HMGN1P05114 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.19■□□□□ 0.18
HMGN1P05114 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMGN1P05114 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.19■□□□□ 0.18
HMGN1P05114 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HMGN1P05114 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
HMGN1P05114 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.19■□□□□ 0.18
HMGN1P05114 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.19■□□□□ 0.18
HMGN1P05114 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMGN1P05114 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMGN1P05114 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMGN1P05114 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMGN1P05114 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.19■□□□□ 0.18
HMGN1P05114 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
HMGN1P05114 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
HMGN1P05114 LINC00304-203ENST00000565008 1864 ntBASIC16.18■□□□□ 0.18
HMGN1P05114 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGN1P05114 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGN1P05114 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.18■□□□□ 0.18
HMGN1P05114 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.18■□□□□ 0.18
HMGN1P05114 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
HMGN1P05114 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HMGN1P05114 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
HMGN1P05114 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.18■□□□□ 0.18
HMGN1P05114 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGN1P05114 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGN1P05114 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HMGN1P05114 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HMGN1P05114 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
HMGN1P05114 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
HMGN1P05114 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.18■□□□□ 0.18
HMGN1P05114 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
HMGN1P05114 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.18■□□□□ 0.18
HMGN1P05114 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.18■□□□□ 0.18
HMGN1P05114 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
HMGN1P05114 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HMGN1P05114 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGN1P05114 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.18■□□□□ 0.18
HMGN1P05114 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.18■□□□□ 0.18
HMGN1P05114 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
HMGN1P05114 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGN1P05114 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGN1P05114 CROCCP2-202ENST00000412962 2773 ntBASIC16.18■□□□□ 0.18
HMGN1P05114 AC099398.1-201ENST00000567919 2776 ntBASIC16.18■□□□□ 0.18
HMGN1P05114 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.18■□□□□ 0.18
HMGN1P05114 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGN1P05114 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGN1P05114 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGN1P05114 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HMGN1P05114 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGN1P05114 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
HMGN1P05114 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.17■□□□□ 0.18
HMGN1P05114 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGN1P05114 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HMGN1P05114 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGN1P05114 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
HMGN1P05114 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGN1P05114 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms