Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TCRAP04437 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TCRAP04437 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC13.61□□□□□ -0.23
TCRAP04437 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC13.61□□□□□ -0.23
TCRAP04437 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
TCRAP04437 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC13.61□□□□□ -0.23
TCRAP04437 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC13.61□□□□□ -0.23
TCRAP04437 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TCRAP04437 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC13.61□□□□□ -0.23
TCRAP04437 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TCRAP04437 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC13.61□□□□□ -0.23
TCRAP04437 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TCRAP04437 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TCRAP04437 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TCRAP04437 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TCRAP04437 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC13.6□□□□□ -0.23
TCRAP04437 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC13.6□□□□□ -0.23
TCRAP04437 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TCRAP04437 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TCRAP04437 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TCRAP04437 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TCRAP04437 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TCRAP04437 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TCRAP04437 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
TCRAP04437 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TCRAP04437 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TCRAP04437 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TCRAP04437 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TCRAP04437 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
TCRAP04437 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TCRAP04437 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC13.6□□□□□ -0.23
TCRAP04437 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC13.6□□□□□ -0.23
TCRAP04437 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC13.6□□□□□ -0.23
TCRAP04437 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TCRAP04437 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TCRAP04437 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TCRAP04437 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TCRAP04437 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TCRAP04437 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC13.6□□□□□ -0.23
TCRAP04437 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC13.6□□□□□ -0.23
TCRAP04437 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC13.6□□□□□ -0.23
TCRAP04437 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TCRAP04437 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC13.6□□□□□ -0.23
TCRAP04437 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC13.6□□□□□ -0.23
TCRAP04437 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC13.6□□□□□ -0.23
TCRAP04437 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC13.6□□□□□ -0.23
TCRAP04437 AC073648.6-201ENST00000641589 218 ntBASIC13.6□□□□□ -0.23
TCRAP04437 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
TCRAP04437 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TCRAP04437 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TCRAP04437 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TCRAP04437 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TCRAP04437 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TCRAP04437 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TCRAP04437 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC13.6□□□□□ -0.23
TCRAP04437 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
TCRAP04437 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC13.59□□□□□ -0.23
TCRAP04437 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TCRAP04437 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TCRAP04437 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
TCRAP04437 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TCRAP04437 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
TCRAP04437 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC13.59□□□□□ -0.23
TCRAP04437 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
TCRAP04437 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC13.59□□□□□ -0.23
TCRAP04437 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
TCRAP04437 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
TCRAP04437 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TCRAP04437 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TCRAP04437 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TCRAP04437 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TCRAP04437 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
TCRAP04437 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
TCRAP04437 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
TCRAP04437 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC13.59□□□□□ -0.23
TCRAP04437 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TCRAP04437 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC13.59□□□□□ -0.23
TCRAP04437 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC13.59□□□□□ -0.23
TCRAP04437 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TCRAP04437 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TCRAP04437 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC13.59□□□□□ -0.23
TCRAP04437 CYGB-204ENST00000589342 815 ntTSL 3 BASIC13.59□□□□□ -0.23
TCRAP04437 LINC01451-201ENST00000623792 534 ntBASIC13.59□□□□□ -0.23
TCRAP04437 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
TCRAP04437 TPR-209ENST00000613151 2478 ntTSL 5 BASIC13.59□□□□□ -0.23
TCRAP04437 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TCRAP04437 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TCRAP04437 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TCRAP04437 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TCRAP04437 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TCRAP04437 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TCRAP04437 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
TCRAP04437 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TCRAP04437 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
TCRAP04437 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
TCRAP04437 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TCRAP04437 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
TCRAP04437 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TCRAP04437 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC13.58□□□□□ -0.23
TCRAP04437 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms