Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TIMP1P01033 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC19.18■□□□□ 0.66
TIMP1P01033 AC068137.2-201ENST00000605408 478 ntBASIC19.18■□□□□ 0.66
TIMP1P01033 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.18■□□□□ 0.66
TIMP1P01033 AL353135.1-201ENST00000606729 504 ntBASIC19.18■□□□□ 0.66
TIMP1P01033 AC019129.2-201ENST00000609837 1235 ntBASIC19.18■□□□□ 0.66
TIMP1P01033 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.18■□□□□ 0.66
TIMP1P01033 AC097637.2-201ENST00000624096 1997 ntBASIC19.18■□□□□ 0.66
TIMP1P01033 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TIMP1P01033 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TIMP1P01033 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
TIMP1P01033 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TIMP1P01033 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
TIMP1P01033 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.18■□□□□ 0.66
TIMP1P01033 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TIMP1P01033 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.18■□□□□ 0.66
TIMP1P01033 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TIMP1P01033 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TIMP1P01033 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TIMP1P01033 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
TIMP1P01033 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
TIMP1P01033 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TIMP1P01033 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TIMP1P01033 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.17■□□□□ 0.66
TIMP1P01033 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.17■□□□□ 0.66
TIMP1P01033 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TIMP1P01033 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TIMP1P01033 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TIMP1P01033 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TIMP1P01033 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TIMP1P01033 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TIMP1P01033 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TIMP1P01033 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.17■□□□□ 0.66
TIMP1P01033 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.17■□□□□ 0.66
TIMP1P01033 FAM86GP-201ENST00000448322 971 ntBASIC19.17■□□□□ 0.66
TIMP1P01033 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TIMP1P01033 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TIMP1P01033 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.17■□□□□ 0.66
TIMP1P01033 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TIMP1P01033 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TIMP1P01033 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TIMP1P01033 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TIMP1P01033 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TIMP1P01033 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.17■□□□□ 0.66
TIMP1P01033 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.17■□□□□ 0.66
TIMP1P01033 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TIMP1P01033 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TIMP1P01033 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TIMP1P01033 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
TIMP1P01033 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
TIMP1P01033 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TIMP1P01033 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.16■□□□□ 0.66
TIMP1P01033 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TIMP1P01033 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TIMP1P01033 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TIMP1P01033 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TIMP1P01033 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.16■□□□□ 0.66
TIMP1P01033 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TIMP1P01033 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TIMP1P01033 CXCL1P1-201ENST00000502804 216 ntBASIC19.16■□□□□ 0.66
TIMP1P01033 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.16■□□□□ 0.66
TIMP1P01033 STK19B-204ENST00000512515 211 ntBASIC19.16■□□□□ 0.66
TIMP1P01033 RNA5SP421-201ENST00000516864 134 ntBASIC19.16■□□□□ 0.66
TIMP1P01033 AC069262.1-201ENST00000539058 672 ntBASIC19.16■□□□□ 0.66
TIMP1P01033 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.16■□□□□ 0.66
TIMP1P01033 AC109462.3-201ENST00000573934 613 ntBASIC19.16■□□□□ 0.66
TIMP1P01033 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TIMP1P01033 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
TIMP1P01033 ANO7L1-203ENST00000602586 1720 ntBASIC19.16■□□□□ 0.66
TIMP1P01033 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TIMP1P01033 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TIMP1P01033 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TIMP1P01033 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
TIMP1P01033 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TIMP1P01033 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TIMP1P01033 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.16■□□□□ 0.66
TIMP1P01033 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TIMP1P01033 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TIMP1P01033 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TIMP1P01033 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TIMP1P01033 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TIMP1P01033 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TIMP1P01033 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TIMP1P01033 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TIMP1P01033 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TIMP1P01033 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC19.15■□□□□ 0.66
TIMP1P01033 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC19.15■□□□□ 0.66
TIMP1P01033 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.15■□□□□ 0.66
TIMP1P01033 STK25P1-201ENST00000585406 838 ntBASIC19.15■□□□□ 0.66
TIMP1P01033 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TIMP1P01033 AJ011932.1-201ENST00000621707 465 ntBASIC19.15■□□□□ 0.66
TIMP1P01033 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TIMP1P01033 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TIMP1P01033 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TIMP1P01033 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TIMP1P01033 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.15■□□□□ 0.66
TIMP1P01033 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TIMP1P01033 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TIMP1P01033 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
TIMP1P01033 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms