Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TOP3BO95985 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
TOP3BO95985 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TOP3BO95985 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.31■□□□□ 0.52
TOP3BO95985 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.31■□□□□ 0.52
TOP3BO95985 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TOP3BO95985 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TOP3BO95985 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.31■□□□□ 0.52
TOP3BO95985 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.31■□□□□ 0.52
TOP3BO95985 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.31■□□□□ 0.52
TOP3BO95985 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TOP3BO95985 AC012317.2-201ENST00000623305 2251 ntBASIC18.3■□□□□ 0.52
TOP3BO95985 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.3■□□□□ 0.52
TOP3BO95985 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TOP3BO95985 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.3■□□□□ 0.52
TOP3BO95985 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TOP3BO95985 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.3■□□□□ 0.52
TOP3BO95985 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TOP3BO95985 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TOP3BO95985 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TOP3BO95985 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TOP3BO95985 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.3■□□□□ 0.52
TOP3BO95985 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.3■□□□□ 0.52
TOP3BO95985 PMS2P1-201ENST00000431037 1228 ntBASIC18.3■□□□□ 0.52
TOP3BO95985 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.3■□□□□ 0.52
TOP3BO95985 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
TOP3BO95985 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.3■□□□□ 0.52
TOP3BO95985 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.3■□□□□ 0.52
TOP3BO95985 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
TOP3BO95985 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.3■□□□□ 0.52
TOP3BO95985 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TOP3BO95985 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TOP3BO95985 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TOP3BO95985 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.3■□□□□ 0.52
TOP3BO95985 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TOP3BO95985 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TOP3BO95985 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TOP3BO95985 PHGDH-209ENST00000641074 1780 ntBASIC18.3■□□□□ 0.52
TOP3BO95985 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TOP3BO95985 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TOP3BO95985 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TOP3BO95985 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TOP3BO95985 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.29■□□□□ 0.52
TOP3BO95985 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.29■□□□□ 0.52
TOP3BO95985 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.29■□□□□ 0.52
TOP3BO95985 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TOP3BO95985 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TOP3BO95985 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TOP3BO95985 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TOP3BO95985 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TOP3BO95985 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.29■□□□□ 0.52
TOP3BO95985 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.29■□□□□ 0.52
TOP3BO95985 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.29■□□□□ 0.52
TOP3BO95985 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.29■□□□□ 0.52
TOP3BO95985 SLC25A1P1-201ENST00000528351 927 ntBASIC18.29■□□□□ 0.52
TOP3BO95985 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.29■□□□□ 0.52
TOP3BO95985 LINC02084-201ENST00000606069 1096 ntBASIC18.29■□□□□ 0.52
TOP3BO95985 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.29■□□□□ 0.52
TOP3BO95985 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TOP3BO95985 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
TOP3BO95985 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TOP3BO95985 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TOP3BO95985 KRT8P50-201ENST00000562022 1438 ntBASIC18.29■□□□□ 0.52
TOP3BO95985 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
TOP3BO95985 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TOP3BO95985 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TOP3BO95985 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TOP3BO95985 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.28■□□□□ 0.52
TOP3BO95985 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.28■□□□□ 0.52
TOP3BO95985 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TOP3BO95985 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.28■□□□□ 0.52
TOP3BO95985 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TOP3BO95985 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TOP3BO95985 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.28■□□□□ 0.52
TOP3BO95985 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TOP3BO95985 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.28■□□□□ 0.52
TOP3BO95985 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TOP3BO95985 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.28■□□□□ 0.52
TOP3BO95985 MIR1233-2-201ENST00000408138 82 ntBASIC18.28■□□□□ 0.52
TOP3BO95985 MIR1233-1-201ENST00000408722 82 ntBASIC18.28■□□□□ 0.52
TOP3BO95985 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.28■□□□□ 0.52
TOP3BO95985 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.28■□□□□ 0.52
TOP3BO95985 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TOP3BO95985 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TOP3BO95985 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
TOP3BO95985 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TOP3BO95985 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TOP3BO95985 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.28■□□□□ 0.52
TOP3BO95985 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TOP3BO95985 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TOP3BO95985 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.28■□□□□ 0.52
TOP3BO95985 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TOP3BO95985 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
TOP3BO95985 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TOP3BO95985 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TOP3BO95985 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.28■□□□□ 0.52
TOP3BO95985 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.28■□□□□ 0.52
TOP3BO95985 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TOP3BO95985 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TOP3BO95985 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms