Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 PHGDH-209ENST00000641074 1780 ntBASIC15.87■□□□□ 0.13
CNOT4O95628 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC15.87■□□□□ 0.13
CNOT4O95628 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.87■□□□□ 0.13
CNOT4O95628 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNOT4O95628 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC15.87■□□□□ 0.13
CNOT4O95628 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
CNOT4O95628 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNOT4O95628 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CNOT4O95628 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CNOT4O95628 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CNOT4O95628 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNOT4O95628 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNOT4O95628 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNOT4O95628 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.86■□□□□ 0.13
CNOT4O95628 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.86■□□□□ 0.13
CNOT4O95628 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CNOT4O95628 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNOT4O95628 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNOT4O95628 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC15.86■□□□□ 0.13
CNOT4O95628 AC099343.3-201ENST00000605834 2503 ntBASIC15.86■□□□□ 0.13
CNOT4O95628 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNOT4O95628 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNOT4O95628 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNOT4O95628 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNOT4O95628 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
CNOT4O95628 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.86■□□□□ 0.13
CNOT4O95628 UNC93B7-201ENST00000509439 705 ntBASIC15.86■□□□□ 0.13
CNOT4O95628 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.86■□□□□ 0.13
CNOT4O95628 AP000867.3-201ENST00000524675 377 ntBASIC15.86■□□□□ 0.13
CNOT4O95628 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNOT4O95628 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.86■□□□□ 0.13
CNOT4O95628 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.86■□□□□ 0.13
CNOT4O95628 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.86■□□□□ 0.13
CNOT4O95628 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.86■□□□□ 0.13
CNOT4O95628 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CNOT4O95628 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CNOT4O95628 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNOT4O95628 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CNOT4O95628 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNOT4O95628 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNOT4O95628 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.86■□□□□ 0.13
CNOT4O95628 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
CNOT4O95628 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC15.86■□□□□ 0.13
CNOT4O95628 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CNOT4O95628 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNOT4O95628 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CNOT4O95628 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNOT4O95628 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CNOT4O95628 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CNOT4O95628 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.85■□□□□ 0.13
CNOT4O95628 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CNOT4O95628 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CNOT4O95628 NFIC-211ENST00000641145 8399 ntBASIC15.85■□□□□ 0.13
CNOT4O95628 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CNOT4O95628 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CNOT4O95628 AR-207ENST00000612010 3896 ntTSL 5 BASIC15.85■□□□□ 0.13
CNOT4O95628 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CNOT4O95628 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CNOT4O95628 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CNOT4O95628 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CNOT4O95628 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC15.85■□□□□ 0.13
CNOT4O95628 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC15.85■□□□□ 0.13
CNOT4O95628 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.85■□□□□ 0.13
CNOT4O95628 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.85■□□□□ 0.13
CNOT4O95628 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
CNOT4O95628 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.85■□□□□ 0.13
CNOT4O95628 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CNOT4O95628 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CNOT4O95628 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CNOT4O95628 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CNOT4O95628 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.85■□□□□ 0.13
CNOT4O95628 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.85■□□□□ 0.13
CNOT4O95628 POM121L3P-201ENST00000419331 1163 ntBASIC15.85■□□□□ 0.13
CNOT4O95628 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CNOT4O95628 IGHV3-47-201ENST00000425060 335 ntBASIC15.85■□□□□ 0.13
CNOT4O95628 AP000347.1-202ENST00000435868 847 ntBASIC15.85■□□□□ 0.13
CNOT4O95628 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.85■□□□□ 0.13
CNOT4O95628 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.85■□□□□ 0.13
CNOT4O95628 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CNOT4O95628 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.85■□□□□ 0.13
CNOT4O95628 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.85■□□□□ 0.13
CNOT4O95628 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CNOT4O95628 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.85■□□□□ 0.13
CNOT4O95628 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CNOT4O95628 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CNOT4O95628 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CNOT4O95628 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC15.85■□□□□ 0.13
CNOT4O95628 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC15.85■□□□□ 0.13
CNOT4O95628 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CNOT4O95628 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CNOT4O95628 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CNOT4O95628 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
CNOT4O95628 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CNOT4O95628 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CNOT4O95628 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CNOT4O95628 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CNOT4O95628 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CNOT4O95628 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.85■□□□□ 0.13
CNOT4O95628 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CNOT4O95628 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms