Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC14.97□□□□□ -0.01
SIX6O95475 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC14.97□□□□□ -0.01
SIX6O95475 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SIX6O95475 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
SIX6O95475 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
SIX6O95475 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SIX6O95475 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC14.97□□□□□ -0.01
SIX6O95475 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC14.97□□□□□ -0.01
SIX6O95475 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC14.97□□□□□ -0.01
SIX6O95475 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SIX6O95475 AC023824.1-201ENST00000562945 2975 ntBASIC14.97□□□□□ -0.01
SIX6O95475 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.97□□□□□ -0.01
SIX6O95475 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SIX6O95475 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
SIX6O95475 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
SIX6O95475 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
SIX6O95475 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SIX6O95475 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SIX6O95475 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC14.97□□□□□ -0.01
SIX6O95475 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SIX6O95475 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
SIX6O95475 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
SIX6O95475 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.96□□□□□ -0.01
SIX6O95475 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SIX6O95475 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SIX6O95475 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SIX6O95475 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC14.96□□□□□ -0.01
SIX6O95475 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SIX6O95475 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.96□□□□□ -0.01
SIX6O95475 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SIX6O95475 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SIX6O95475 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SIX6O95475 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.96□□□□□ -0.01
SIX6O95475 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SIX6O95475 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC14.96□□□□□ -0.01
SIX6O95475 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.96□□□□□ -0.01
SIX6O95475 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
SIX6O95475 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SIX6O95475 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC14.96□□□□□ -0.01
SIX6O95475 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.96□□□□□ -0.01
SIX6O95475 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
SIX6O95475 AC005837.3-201ENST00000612163 286 ntBASIC14.96□□□□□ -0.01
SIX6O95475 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SIX6O95475 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.01
SIX6O95475 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SIX6O95475 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SIX6O95475 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SIX6O95475 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
SIX6O95475 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
SIX6O95475 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
SIX6O95475 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
SIX6O95475 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SIX6O95475 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
SIX6O95475 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SIX6O95475 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
SIX6O95475 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SIX6O95475 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SIX6O95475 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SIX6O95475 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SIX6O95475 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.95□□□□□ -0.02
SIX6O95475 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SIX6O95475 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SIX6O95475 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SIX6O95475 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SIX6O95475 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SIX6O95475 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SIX6O95475 HACD1-201ENST00000326961 773 ntTSL 2 BASIC14.95□□□□□ -0.02
SIX6O95475 TREX2-204ENST00000370212 861 ntTSL 5 BASIC14.95□□□□□ -0.02
SIX6O95475 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SIX6O95475 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SIX6O95475 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC14.95□□□□□ -0.02
SIX6O95475 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
SIX6O95475 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC14.95□□□□□ -0.02
SIX6O95475 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC14.95□□□□□ -0.02
SIX6O95475 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SIX6O95475 AL121829.2-201ENST00000620908 328 ntBASIC14.95□□□□□ -0.02
SIX6O95475 AC231657.2-201ENST00000624556 255 ntBASIC14.95□□□□□ -0.02
SIX6O95475 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SIX6O95475 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SIX6O95475 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC14.95□□□□□ -0.02
SIX6O95475 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SIX6O95475 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SIX6O95475 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SIX6O95475 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SIX6O95475 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SIX6O95475 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.95□□□□□ -0.02
SIX6O95475 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SIX6O95475 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SIX6O95475 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC14.95□□□□□ -0.02
SIX6O95475 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SIX6O95475 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC14.95□□□□□ -0.02
SIX6O95475 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.94□□□□□ -0.02
SIX6O95475 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SIX6O95475 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SIX6O95475 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SIX6O95475 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SIX6O95475 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SIX6O95475 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SIX6O95475 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.94□□□□□ -0.02
SIX6O95475 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms