Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.96■□□□□ 0.15
CDRT1O95170 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDRT1O95170 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDRT1O95170 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
CDRT1O95170 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.96■□□□□ 0.15
CDRT1O95170 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDRT1O95170 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC15.96■□□□□ 0.15
CDRT1O95170 AGGF1P2-201ENST00000426656 2106 ntBASIC15.96■□□□□ 0.15
CDRT1O95170 AC133681.1-201ENST00000465482 601 ntBASIC15.96■□□□□ 0.15
CDRT1O95170 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC15.96■□□□□ 0.15
CDRT1O95170 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDRT1O95170 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.96■□□□□ 0.15
CDRT1O95170 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CDRT1O95170 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDRT1O95170 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDRT1O95170 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDRT1O95170 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.96■□□□□ 0.15
CDRT1O95170 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDRT1O95170 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC15.96■□□□□ 0.14
CDRT1O95170 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.96■□□□□ 0.14
CDRT1O95170 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.96■□□□□ 0.14
CDRT1O95170 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.96■□□□□ 0.14
CDRT1O95170 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDRT1O95170 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.95■□□□□ 0.14
CDRT1O95170 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC15.95■□□□□ 0.14
CDRT1O95170 AL109659.2-201ENST00000606809 1674 ntBASIC15.95■□□□□ 0.14
CDRT1O95170 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDRT1O95170 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC15.95■□□□□ 0.14
CDRT1O95170 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDRT1O95170 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.95■□□□□ 0.14
CDRT1O95170 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDRT1O95170 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDRT1O95170 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDRT1O95170 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDRT1O95170 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
CDRT1O95170 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDRT1O95170 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDRT1O95170 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDRT1O95170 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDRT1O95170 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDRT1O95170 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDRT1O95170 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC15.95■□□□□ 0.14
CDRT1O95170 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDRT1O95170 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC15.95■□□□□ 0.14
CDRT1O95170 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC15.95■□□□□ 0.14
CDRT1O95170 ABBA01031674.1-201ENST00000635145 728 ntBASIC15.95■□□□□ 0.14
CDRT1O95170 CABP2-204ENST00000636477 941 ntTSL 5 BASIC15.95■□□□□ 0.14
CDRT1O95170 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDRT1O95170 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDRT1O95170 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDRT1O95170 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDRT1O95170 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDRT1O95170 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CDRT1O95170 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.95■□□□□ 0.14
CDRT1O95170 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.95■□□□□ 0.14
CDRT1O95170 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDRT1O95170 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDRT1O95170 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.95■□□□□ 0.14
CDRT1O95170 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDRT1O95170 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CDRT1O95170 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC15.95■□□□□ 0.14
CDRT1O95170 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.95■□□□□ 0.14
CDRT1O95170 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDRT1O95170 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDRT1O95170 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
CDRT1O95170 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
CDRT1O95170 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDRT1O95170 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDRT1O95170 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDRT1O95170 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDRT1O95170 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDRT1O95170 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.94■□□□□ 0.14
CDRT1O95170 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC15.94■□□□□ 0.14
CDRT1O95170 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
CDRT1O95170 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDRT1O95170 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDRT1O95170 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.94■□□□□ 0.14
CDRT1O95170 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDRT1O95170 AC004951.3-201ENST00000418645 1148 ntBASIC15.94■□□□□ 0.14
CDRT1O95170 PPP1R14BP5-201ENST00000440334 435 ntBASIC15.94■□□□□ 0.14
CDRT1O95170 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC15.94■□□□□ 0.14
CDRT1O95170 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC15.94■□□□□ 0.14
CDRT1O95170 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDRT1O95170 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC15.94■□□□□ 0.14
CDRT1O95170 AC006058.3-201ENST00000606217 1069 ntBASIC15.94■□□□□ 0.14
CDRT1O95170 AC073648.6-201ENST00000641589 218 ntBASIC15.94■□□□□ 0.14
CDRT1O95170 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDRT1O95170 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
CDRT1O95170 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDRT1O95170 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDRT1O95170 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDRT1O95170 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDRT1O95170 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDRT1O95170 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CDRT1O95170 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDRT1O95170 DOC2GP-204ENST00000639052 2548 ntBASIC15.94■□□□□ 0.14
CDRT1O95170 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
CDRT1O95170 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.94■□□□□ 0.14
CDRT1O95170 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDRT1O95170 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms