Protein–RNA interactions for Protein: O95167

NDUFA3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3O95167 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFA3O95167 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFA3O95167 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFA3O95167 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC14.29□□□□□ -0.12
NDUFA3O95167 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFA3O95167 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFA3O95167 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFA3O95167 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFA3O95167 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFA3O95167 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFA3O95167 ISCU-203ENST00000431221 799 ntTSL 2 BASIC14.29□□□□□ -0.12
NDUFA3O95167 MTCL1P1-201ENST00000446207 792 ntBASIC14.29□□□□□ -0.12
NDUFA3O95167 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC14.29□□□□□ -0.12
NDUFA3O95167 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC14.29□□□□□ -0.12
NDUFA3O95167 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.29□□□□□ -0.12
NDUFA3O95167 GUSBP12-201ENST00000513727 720 ntBASIC14.29□□□□□ -0.12
NDUFA3O95167 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFA3O95167 PTK2-216ENST00000519881 863 ntTSL 3 BASIC14.29□□□□□ -0.12
NDUFA3O95167 KRT8P26-201ENST00000534154 1276 ntBASIC14.29□□□□□ -0.12
NDUFA3O95167 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC14.29□□□□□ -0.12
NDUFA3O95167 RMI2-205ENST00000576027 818 ntTSL 2 BASIC14.29□□□□□ -0.12
NDUFA3O95167 NDUFV2-AS1-203ENST00000608008 779 ntBASIC14.29□□□□□ -0.12
NDUFA3O95167 AC116407.4-201ENST00000623319 1061 ntBASIC14.29□□□□□ -0.12
NDUFA3O95167 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.29□□□□□ -0.12
NDUFA3O95167 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
NDUFA3O95167 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC14.29□□□□□ -0.12
NDUFA3O95167 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC14.29□□□□□ -0.12
NDUFA3O95167 KRT8P47-201ENST00000604727 1398 ntBASIC14.29□□□□□ -0.12
NDUFA3O95167 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFA3O95167 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.29□□□□□ -0.12
NDUFA3O95167 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFA3O95167 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFA3O95167 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFA3O95167 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
NDUFA3O95167 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14.29□□□□□ -0.12
NDUFA3O95167 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFA3O95167 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC14.29□□□□□ -0.12
NDUFA3O95167 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFA3O95167 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
NDUFA3O95167 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC14.29□□□□□ -0.12
NDUFA3O95167 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFA3O95167 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFA3O95167 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFA3O95167 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFA3O95167 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFA3O95167 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFA3O95167 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC14.28□□□□□ -0.12
NDUFA3O95167 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFA3O95167 BET1L-202ENST00000332865 533 ntTSL 5 BASIC14.28□□□□□ -0.12
NDUFA3O95167 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFA3O95167 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFA3O95167 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
NDUFA3O95167 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFA3O95167 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFA3O95167 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFA3O95167 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFA3O95167 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
NDUFA3O95167 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFA3O95167 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFA3O95167 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
NDUFA3O95167 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFA3O95167 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
NDUFA3O95167 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
NDUFA3O95167 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC14.28□□□□□ -0.12
NDUFA3O95167 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
NDUFA3O95167 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFA3O95167 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.28□□□□□ -0.12
NDUFA3O95167 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFA3O95167 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC14.28□□□□□ -0.12
NDUFA3O95167 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.28□□□□□ -0.12
NDUFA3O95167 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFA3O95167 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14.28□□□□□ -0.12
NDUFA3O95167 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC14.28□□□□□ -0.12
NDUFA3O95167 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
NDUFA3O95167 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
NDUFA3O95167 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC14.28□□□□□ -0.12
NDUFA3O95167 AC005332.8-201ENST00000622750 2735 ntBASIC14.28□□□□□ -0.12
NDUFA3O95167 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.28□□□□□ -0.12
NDUFA3O95167 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFA3O95167 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFA3O95167 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NDUFA3O95167 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NDUFA3O95167 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
NDUFA3O95167 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NDUFA3O95167 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.27□□□□□ -0.12
NDUFA3O95167 AC018470.1-201ENST00000624790 3129 ntBASIC14.27□□□□□ -0.12
NDUFA3O95167 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NDUFA3O95167 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NDUFA3O95167 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
NDUFA3O95167 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NDUFA3O95167 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC14.27□□□□□ -0.13
NDUFA3O95167 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NDUFA3O95167 DDX43P3-201ENST00000441064 443 ntBASIC14.27□□□□□ -0.13
NDUFA3O95167 RN7SL606P-201ENST00000472779 293 ntBASIC14.27□□□□□ -0.13
NDUFA3O95167 AC090616.6-201ENST00000582640 721 ntBASIC14.27□□□□□ -0.13
NDUFA3O95167 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NDUFA3O95167 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC14.27□□□□□ -0.13
NDUFA3O95167 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NDUFA3O95167 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NDUFA3O95167 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms