Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
UBL3O95164 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.04■□□□□ 0.16
UBL3O95164 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
UBL3O95164 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
UBL3O95164 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
UBL3O95164 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
UBL3O95164 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.04■□□□□ 0.16
UBL3O95164 SPDYE15P-201ENST00000424157 909 ntBASIC16.04■□□□□ 0.16
UBL3O95164 AL359075.1-203ENST00000462729 1002 ntBASIC16.04■□□□□ 0.16
UBL3O95164 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.04■□□□□ 0.16
UBL3O95164 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.04■□□□□ 0.16
UBL3O95164 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.04■□□□□ 0.16
UBL3O95164 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.04■□□□□ 0.16
UBL3O95164 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.04■□□□□ 0.16
UBL3O95164 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.04■□□□□ 0.16
UBL3O95164 AC008687.5-201ENST00000593746 558 ntBASIC16.04■□□□□ 0.16
UBL3O95164 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.04■□□□□ 0.16
UBL3O95164 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
UBL3O95164 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
UBL3O95164 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.04■□□□□ 0.16
UBL3O95164 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
UBL3O95164 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
UBL3O95164 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
UBL3O95164 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
UBL3O95164 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
UBL3O95164 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
UBL3O95164 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.04■□□□□ 0.16
UBL3O95164 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
UBL3O95164 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
UBL3O95164 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.04■□□□□ 0.16
UBL3O95164 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBL3O95164 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
UBL3O95164 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
UBL3O95164 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.03■□□□□ 0.16
UBL3O95164 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBL3O95164 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
UBL3O95164 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBL3O95164 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBL3O95164 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.03■□□□□ 0.16
UBL3O95164 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
UBL3O95164 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
UBL3O95164 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.03■□□□□ 0.16
UBL3O95164 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBL3O95164 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.03■□□□□ 0.16
UBL3O95164 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
UBL3O95164 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBL3O95164 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
UBL3O95164 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
UBL3O95164 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
UBL3O95164 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.03■□□□□ 0.16
UBL3O95164 GMCL1P1-201ENST00000463439 1581 ntBASIC16.03■□□□□ 0.16
UBL3O95164 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
UBL3O95164 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.03■□□□□ 0.16
UBL3O95164 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
UBL3O95164 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBL3O95164 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBL3O95164 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.03■□□□□ 0.16
UBL3O95164 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBL3O95164 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBL3O95164 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBL3O95164 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.02■□□□□ 0.16
UBL3O95164 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
UBL3O95164 SDHAP2-201ENST00000455183 2001 ntBASIC16.02■□□□□ 0.16
UBL3O95164 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
UBL3O95164 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
UBL3O95164 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
UBL3O95164 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.02■□□□□ 0.16
UBL3O95164 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
UBL3O95164 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
UBL3O95164 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
UBL3O95164 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
UBL3O95164 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.02■□□□□ 0.16
UBL3O95164 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
UBL3O95164 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
UBL3O95164 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.02■□□□□ 0.16
UBL3O95164 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.02■□□□□ 0.16
UBL3O95164 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
UBL3O95164 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
UBL3O95164 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
UBL3O95164 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
UBL3O95164 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
UBL3O95164 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
UBL3O95164 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
UBL3O95164 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.02■□□□□ 0.15
UBL3O95164 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.02■□□□□ 0.15
UBL3O95164 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
UBL3O95164 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
UBL3O95164 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
UBL3O95164 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.02■□□□□ 0.15
UBL3O95164 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.02■□□□□ 0.15
UBL3O95164 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
UBL3O95164 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
UBL3O95164 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
UBL3O95164 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBL3O95164 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBL3O95164 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.01■□□□□ 0.15
UBL3O95164 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
UBL3O95164 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBL3O95164 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBL3O95164 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms