Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
UPK1BO75841 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC15.56■□□□□ 0.08
UPK1BO75841 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC15.56■□□□□ 0.08
UPK1BO75841 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC15.56■□□□□ 0.08
UPK1BO75841 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC15.56■□□□□ 0.08
UPK1BO75841 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC15.56■□□□□ 0.08
UPK1BO75841 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC15.56■□□□□ 0.08
UPK1BO75841 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
UPK1BO75841 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
UPK1BO75841 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
UPK1BO75841 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC15.56■□□□□ 0.08
UPK1BO75841 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
UPK1BO75841 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
UPK1BO75841 KRT8P41-201ENST00000533985 1514 ntBASIC15.56■□□□□ 0.08
UPK1BO75841 GPAT2P1-201ENST00000444924 1672 ntBASIC15.56■□□□□ 0.08
UPK1BO75841 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
UPK1BO75841 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC15.56■□□□□ 0.08
UPK1BO75841 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
UPK1BO75841 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
UPK1BO75841 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
UPK1BO75841 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.56■□□□□ 0.08
UPK1BO75841 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
UPK1BO75841 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
UPK1BO75841 AL365203.3-201ENST00000609742 2057 ntBASIC15.56■□□□□ 0.08
UPK1BO75841 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
UPK1BO75841 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
UPK1BO75841 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
UPK1BO75841 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
UPK1BO75841 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
UPK1BO75841 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
UPK1BO75841 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
UPK1BO75841 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
UPK1BO75841 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
UPK1BO75841 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.55■□□□□ 0.08
UPK1BO75841 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
UPK1BO75841 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
UPK1BO75841 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
UPK1BO75841 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
UPK1BO75841 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
UPK1BO75841 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC15.55■□□□□ 0.08
UPK1BO75841 KRT17P1-201ENST00000399211 1546 ntBASIC15.55■□□□□ 0.08
UPK1BO75841 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC15.55■□□□□ 0.08
UPK1BO75841 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
UPK1BO75841 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC15.55■□□□□ 0.08
UPK1BO75841 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
UPK1BO75841 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC15.55■□□□□ 0.08
UPK1BO75841 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
UPK1BO75841 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
UPK1BO75841 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC15.55■□□□□ 0.08
UPK1BO75841 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
UPK1BO75841 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC15.55■□□□□ 0.08
UPK1BO75841 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC15.55■□□□□ 0.08
UPK1BO75841 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC15.55■□□□□ 0.08
UPK1BO75841 AC005829.2-201ENST00000571422 1056 ntBASIC15.55■□□□□ 0.08
UPK1BO75841 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
UPK1BO75841 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC15.55■□□□□ 0.08
UPK1BO75841 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
UPK1BO75841 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
UPK1BO75841 RNF216P1-203ENST00000404404 2427 ntBASIC15.55■□□□□ 0.08
UPK1BO75841 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
UPK1BO75841 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
UPK1BO75841 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
UPK1BO75841 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
UPK1BO75841 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
UPK1BO75841 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
UPK1BO75841 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.55■□□□□ 0.08
UPK1BO75841 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.55■□□□□ 0.08
UPK1BO75841 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.55■□□□□ 0.08
UPK1BO75841 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
UPK1BO75841 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.54■□□□□ 0.08
UPK1BO75841 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UPK1BO75841 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.54■□□□□ 0.08
UPK1BO75841 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UPK1BO75841 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
UPK1BO75841 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
UPK1BO75841 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
UPK1BO75841 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
UPK1BO75841 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
UPK1BO75841 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
UPK1BO75841 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UPK1BO75841 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
UPK1BO75841 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UPK1BO75841 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
UPK1BO75841 AC126177.1-201ENST00000547829 2218 ntBASIC15.54■□□□□ 0.08
UPK1BO75841 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UPK1BO75841 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
UPK1BO75841 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UPK1BO75841 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
UPK1BO75841 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
UPK1BO75841 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
UPK1BO75841 PBX2P1-201ENST00000493219 1291 ntBASIC15.54■□□□□ 0.08
UPK1BO75841 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC15.54■□□□□ 0.08
UPK1BO75841 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
UPK1BO75841 BID-214ENST00000617586 542 ntTSL 5 BASIC15.54■□□□□ 0.08
UPK1BO75841 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
UPK1BO75841 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
UPK1BO75841 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
UPK1BO75841 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
UPK1BO75841 AC078925.2-201ENST00000624013 1973 ntBASIC15.54■□□□□ 0.08
UPK1BO75841 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms