Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
BRD4O60885 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
BRD4O60885 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC24.62■■□□□ 1.53
BRD4O60885 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC24.62■■□□□ 1.53
BRD4O60885 PGAM5P1-201ENST00000518923 814 ntBASIC24.62■■□□□ 1.53
BRD4O60885 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC24.62■■□□□ 1.53
BRD4O60885 PNMT-203ENST00000581428 677 ntTSL 2 BASIC24.62■■□□□ 1.53
BRD4O60885 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC24.62■■□□□ 1.53
BRD4O60885 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
BRD4O60885 AC025062.2-201ENST00000605477 670 ntBASIC24.62■■□□□ 1.53
BRD4O60885 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
BRD4O60885 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
BRD4O60885 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC24.62■■□□□ 1.53
BRD4O60885 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC24.62■■□□□ 1.53
BRD4O60885 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
BRD4O60885 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC24.62■■□□□ 1.53
BRD4O60885 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
BRD4O60885 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
BRD4O60885 SP100-208ENST00000427101 1922 ntTSL 2 BASIC24.62■■□□□ 1.53
BRD4O60885 AL356309.3-201ENST00000624132 1934 ntBASIC24.62■■□□□ 1.53
BRD4O60885 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC24.62■■□□□ 1.53
BRD4O60885 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
BRD4O60885 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
BRD4O60885 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
BRD4O60885 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
BRD4O60885 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
BRD4O60885 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
BRD4O60885 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
BRD4O60885 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC24.61■■□□□ 1.53
BRD4O60885 SOD2-201ENST00000337404 991 ntTSL 2 BASIC24.61■■□□□ 1.53
BRD4O60885 FABP5-202ENST00000396359 986 ntTSL 5 BASIC24.61■■□□□ 1.53
BRD4O60885 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
BRD4O60885 BX842568.4-201ENST00000421222 227 ntBASIC24.61■■□□□ 1.53
BRD4O60885 SLC25A6P5-201ENST00000435663 894 ntBASIC24.61■■□□□ 1.53
BRD4O60885 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
BRD4O60885 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
BRD4O60885 AC112698.1-201ENST00000510299 916 ntBASIC24.61■■□□□ 1.53
BRD4O60885 POLD2P1-201ENST00000511220 997 ntBASIC24.61■■□□□ 1.53
BRD4O60885 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC24.61■■□□□ 1.53
BRD4O60885 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
BRD4O60885 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
BRD4O60885 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
BRD4O60885 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC24.61■■□□□ 1.53
BRD4O60885 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC24.61■■□□□ 1.53
BRD4O60885 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
BRD4O60885 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
BRD4O60885 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
BRD4O60885 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
BRD4O60885 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
BRD4O60885 GATB-213ENST00000515812 1893 ntTSL 5 BASIC24.6■■□□□ 1.53
BRD4O60885 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
BRD4O60885 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
BRD4O60885 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
BRD4O60885 LINC00602-201ENST00000629776 2065 ntBASIC24.6■■□□□ 1.53
BRD4O60885 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
BRD4O60885 CD9-202ENST00000382515 1229 ntTSL 5 BASIC24.6■■□□□ 1.53
BRD4O60885 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC24.6■■□□□ 1.53
BRD4O60885 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
BRD4O60885 TERC-201ENST00000602385 541 ntBASIC24.6■■□□□ 1.53
BRD4O60885 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
BRD4O60885 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
BRD4O60885 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
BRD4O60885 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
BRD4O60885 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
BRD4O60885 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC24.6■■□□□ 1.53
BRD4O60885 AC068880.1-201ENST00000507289 2297 ntBASIC24.6■■□□□ 1.53
BRD4O60885 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
BRD4O60885 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC24.6■■□□□ 1.53
BRD4O60885 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
BRD4O60885 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC24.6■■□□□ 1.53
BRD4O60885 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
BRD4O60885 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
BRD4O60885 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
BRD4O60885 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
BRD4O60885 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
BRD4O60885 FUOM-202ENST00000368551 628 ntTSL 3 BASIC24.59■■□□□ 1.53
BRD4O60885 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC24.59■■□□□ 1.53
BRD4O60885 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
BRD4O60885 CSF3-203ENST00000394148 622 ntTSL 3 BASIC24.59■■□□□ 1.53
BRD4O60885 LBH-204ENST00000406087 559 ntTSL 4 BASIC24.59■■□□□ 1.53
BRD4O60885 RAB17-203ENST00000409576 466 ntTSL 3 BASIC24.59■■□□□ 1.53
BRD4O60885 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
BRD4O60885 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC24.59■■□□□ 1.53
BRD4O60885 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC24.59■■□□□ 1.53
BRD4O60885 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC24.59■■□□□ 1.53
BRD4O60885 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC24.59■■□□□ 1.53
BRD4O60885 FAM197Y3-203ENST00000618346 717 ntBASIC24.59■■□□□ 1.53
BRD4O60885 AC097374.2-201ENST00000618617 1306 ntBASIC24.59■■□□□ 1.53
BRD4O60885 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
BRD4O60885 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
BRD4O60885 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
BRD4O60885 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC24.59■■□□□ 1.53
BRD4O60885 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
BRD4O60885 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
BRD4O60885 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC24.59■■□□□ 1.53
BRD4O60885 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
BRD4O60885 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
BRD4O60885 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
BRD4O60885 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
BRD4O60885 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms