Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA12O60330 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.7■□□□□ 0.42
PCDHGA12O60330 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.7■□□□□ 0.42
PCDHGA12O60330 AL138831.2-201ENST00000606564 490 ntBASIC17.7■□□□□ 0.42
PCDHGA12O60330 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA12O60330 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHGA12O60330 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA12O60330 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA12O60330 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PCDHGA12O60330 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA12O60330 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA12O60330 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA12O60330 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHGA12O60330 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA12O60330 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDHGA12O60330 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA12O60330 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA12O60330 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHGA12O60330 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHGA12O60330 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA12O60330 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA12O60330 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA12O60330 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA12O60330 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA12O60330 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA12O60330 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDHGA12O60330 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA12O60330 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA12O60330 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA12O60330 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PCDHGA12O60330 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA12O60330 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA12O60330 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA12O60330 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA12O60330 FAM220CP-201ENST00000395253 831 ntBASIC17.69■□□□□ 0.42
PCDHGA12O60330 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDHGA12O60330 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHGA12O60330 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.69■□□□□ 0.42
PCDHGA12O60330 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.69■□□□□ 0.42
PCDHGA12O60330 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDHGA12O60330 AC145285.3-201ENST00000564603 959 ntBASIC17.69■□□□□ 0.42
PCDHGA12O60330 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.69■□□□□ 0.42
PCDHGA12O60330 AC011467.2-201ENST00000598425 242 ntBASIC17.69■□□□□ 0.42
PCDHGA12O60330 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA12O60330 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.69■□□□□ 0.42
PCDHGA12O60330 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDHGA12O60330 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDHGA12O60330 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
PCDHGA12O60330 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA12O60330 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDHGA12O60330 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDHGA12O60330 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA12O60330 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA12O60330 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHGA12O60330 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHGA12O60330 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA12O60330 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA12O60330 AL354751.1-201ENST00000412768 1863 ntBASIC17.69■□□□□ 0.42
PCDHGA12O60330 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA12O60330 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA12O60330 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PCDHGA12O60330 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA12O60330 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA12O60330 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PCDHGA12O60330 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.68■□□□□ 0.42
PCDHGA12O60330 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA12O60330 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGA12O60330 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA12O60330 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGA12O60330 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGA12O60330 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
PCDHGA12O60330 MTCL1P1-201ENST00000446207 792 ntBASIC17.68■□□□□ 0.42
PCDHGA12O60330 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
PCDHGA12O60330 AC092183.1-201ENST00000469884 875 ntBASIC17.68■□□□□ 0.42
PCDHGA12O60330 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA12O60330 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGA12O60330 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGA12O60330 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA12O60330 AP005117.1-201ENST00000584346 1413 ntBASIC17.68■□□□□ 0.42
PCDHGA12O60330 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGA12O60330 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDHGA12O60330 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDHGA12O60330 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA12O60330 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PCDHGA12O60330 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PCDHGA12O60330 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA12O60330 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA12O60330 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PCDHGA12O60330 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA12O60330 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA12O60330 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGA12O60330 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDHGA12O60330 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGA12O60330 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
PCDHGA12O60330 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PCDHGA12O60330 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA12O60330 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA12O60330 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA12O60330 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGA12O60330 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms