Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
URB1O60287 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
URB1O60287 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
URB1O60287 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.85■□□□□ 0.29
URB1O60287 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.85■□□□□ 0.29
URB1O60287 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
URB1O60287 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
URB1O60287 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
URB1O60287 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.85■□□□□ 0.29
URB1O60287 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.85■□□□□ 0.29
URB1O60287 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.85■□□□□ 0.29
URB1O60287 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.85■□□□□ 0.29
URB1O60287 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.85■□□□□ 0.29
URB1O60287 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
URB1O60287 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
URB1O60287 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
URB1O60287 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
URB1O60287 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.85■□□□□ 0.29
URB1O60287 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
URB1O60287 AC093484.2-201ENST00000580996 2166 ntBASIC16.85■□□□□ 0.29
URB1O60287 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
URB1O60287 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
URB1O60287 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
URB1O60287 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.85■□□□□ 0.29
URB1O60287 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.85■□□□□ 0.29
URB1O60287 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.85■□□□□ 0.29
URB1O60287 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
URB1O60287 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
URB1O60287 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.85■□□□□ 0.29
URB1O60287 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
URB1O60287 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.85■□□□□ 0.29
URB1O60287 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.85■□□□□ 0.29
URB1O60287 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
URB1O60287 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
URB1O60287 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.85■□□□□ 0.29
URB1O60287 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.85■□□□□ 0.29
URB1O60287 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
URB1O60287 HCG11-201ENST00000411553 5696 ntBASIC16.85■□□□□ 0.29
URB1O60287 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
URB1O60287 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.85■□□□□ 0.29
URB1O60287 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
URB1O60287 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
URB1O60287 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
URB1O60287 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
URB1O60287 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
URB1O60287 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
URB1O60287 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
URB1O60287 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.84■□□□□ 0.29
URB1O60287 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
URB1O60287 FEM1AP3-201ENST00000403722 1741 ntBASIC16.84■□□□□ 0.29
URB1O60287 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
URB1O60287 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
URB1O60287 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
URB1O60287 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
URB1O60287 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
URB1O60287 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
URB1O60287 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.84■□□□□ 0.29
URB1O60287 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
URB1O60287 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.84■□□□□ 0.29
URB1O60287 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.84■□□□□ 0.29
URB1O60287 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.84■□□□□ 0.29
URB1O60287 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
URB1O60287 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
URB1O60287 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.84■□□□□ 0.29
URB1O60287 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
URB1O60287 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
URB1O60287 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.84■□□□□ 0.29
URB1O60287 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
URB1O60287 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
URB1O60287 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
URB1O60287 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
URB1O60287 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
URB1O60287 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
URB1O60287 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
URB1O60287 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
URB1O60287 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.84■□□□□ 0.29
URB1O60287 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.84■□□□□ 0.29
URB1O60287 AC009154.2-201ENST00000621177 724 ntBASIC16.84■□□□□ 0.29
URB1O60287 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.83■□□□□ 0.29
URB1O60287 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
URB1O60287 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
URB1O60287 IRX1P1-201ENST00000438849 1838 ntBASIC16.83■□□□□ 0.29
URB1O60287 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
URB1O60287 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
URB1O60287 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
URB1O60287 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
URB1O60287 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
URB1O60287 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
URB1O60287 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.83■□□□□ 0.28
URB1O60287 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.83■□□□□ 0.28
URB1O60287 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
URB1O60287 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.83■□□□□ 0.28
URB1O60287 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.83■□□□□ 0.28
URB1O60287 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
URB1O60287 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
URB1O60287 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
URB1O60287 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
URB1O60287 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
URB1O60287 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
URB1O60287 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms