Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP3B1O00203 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
AP3B1O00203 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
AP3B1O00203 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP3B1O00203 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP3B1O00203 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP3B1O00203 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP3B1O00203 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP3B1O00203 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP3B1O00203 MIR662-201ENST00000384847 95 ntBASIC18.06■□□□□ 0.48
AP3B1O00203 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
AP3B1O00203 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
AP3B1O00203 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.06■□□□□ 0.48
AP3B1O00203 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.06■□□□□ 0.48
AP3B1O00203 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.06■□□□□ 0.48
AP3B1O00203 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
AP3B1O00203 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.06■□□□□ 0.48
AP3B1O00203 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.06■□□□□ 0.48
AP3B1O00203 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.06■□□□□ 0.48
AP3B1O00203 AC004263.2-201ENST00000617183 678 ntBASIC18.06■□□□□ 0.48
AP3B1O00203 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP3B1O00203 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
AP3B1O00203 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
AP3B1O00203 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.06■□□□□ 0.48
AP3B1O00203 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.06■□□□□ 0.48
AP3B1O00203 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
AP3B1O00203 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.06■□□□□ 0.48
AP3B1O00203 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP3B1O00203 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP3B1O00203 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
AP3B1O00203 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP3B1O00203 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP3B1O00203 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP3B1O00203 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP3B1O00203 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.06■□□□□ 0.48
AP3B1O00203 AL355312.1-201ENST00000407115 2176 ntBASIC18.06■□□□□ 0.48
AP3B1O00203 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP3B1O00203 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
AP3B1O00203 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP3B1O00203 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP3B1O00203 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.05■□□□□ 0.48
AP3B1O00203 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
AP3B1O00203 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
AP3B1O00203 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP3B1O00203 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP3B1O00203 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.05■□□□□ 0.48
AP3B1O00203 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
AP3B1O00203 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP3B1O00203 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
AP3B1O00203 IGHGP-201ENST00000390555 1178 ntBASIC18.05■□□□□ 0.48
AP3B1O00203 AC117947.1-201ENST00000427448 529 ntBASIC18.05■□□□□ 0.48
AP3B1O00203 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.05■□□□□ 0.48
AP3B1O00203 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
AP3B1O00203 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP3B1O00203 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP3B1O00203 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.05■□□□□ 0.48
AP3B1O00203 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP3B1O00203 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
AP3B1O00203 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.04■□□□□ 0.48
AP3B1O00203 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
AP3B1O00203 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
AP3B1O00203 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.04■□□□□ 0.48
AP3B1O00203 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP3B1O00203 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
AP3B1O00203 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP3B1O00203 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP3B1O00203 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP3B1O00203 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP3B1O00203 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
AP3B1O00203 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP3B1O00203 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP3B1O00203 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.04■□□□□ 0.48
AP3B1O00203 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.04■□□□□ 0.48
AP3B1O00203 AC112698.1-201ENST00000510299 916 ntBASIC18.04■□□□□ 0.48
AP3B1O00203 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.04■□□□□ 0.48
AP3B1O00203 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.04■□□□□ 0.48
AP3B1O00203 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
AP3B1O00203 LINC01023-201ENST00000606054 436 ntBASIC18.04■□□□□ 0.48
AP3B1O00203 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.04■□□□□ 0.48
AP3B1O00203 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.04■□□□□ 0.48
AP3B1O00203 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.04■□□□□ 0.48
AP3B1O00203 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
AP3B1O00203 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP3B1O00203 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
AP3B1O00203 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP3B1O00203 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP3B1O00203 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP3B1O00203 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
AP3B1O00203 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP3B1O00203 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP3B1O00203 BX276092.7-203ENST00000637198 1536 ntBASIC18.03■□□□□ 0.48
AP3B1O00203 LINC00304-203ENST00000565008 1864 ntBASIC18.03■□□□□ 0.48
AP3B1O00203 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
AP3B1O00203 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
AP3B1O00203 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
AP3B1O00203 AC009949.1-201ENST00000623048 1830 ntBASIC18.03■□□□□ 0.48
AP3B1O00203 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP3B1O00203 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP3B1O00203 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP3B1O00203 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms