Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 CROCCP2-202ENST00000412962 2773 ntBASIC19.68■□□□□ 0.74
TRIM49BA6NDI0 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM49BA6NDI0 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM49BA6NDI0 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TRIM49BA6NDI0 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM49BA6NDI0 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM49BA6NDI0 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM49BA6NDI0 AC112907.2-201ENST00000448639 330 ntBASIC19.68■□□□□ 0.74
TRIM49BA6NDI0 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.68■□□□□ 0.74
TRIM49BA6NDI0 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM49BA6NDI0 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.68■□□□□ 0.74
TRIM49BA6NDI0 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
TRIM49BA6NDI0 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.68■□□□□ 0.74
TRIM49BA6NDI0 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM49BA6NDI0 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM49BA6NDI0 PCDHA12-202ENST00000613593 2588 ntBASIC19.68■□□□□ 0.74
TRIM49BA6NDI0 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
TRIM49BA6NDI0 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM49BA6NDI0 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM49BA6NDI0 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM49BA6NDI0 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
TRIM49BA6NDI0 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
TRIM49BA6NDI0 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM49BA6NDI0 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM49BA6NDI0 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM49BA6NDI0 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM49BA6NDI0 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM49BA6NDI0 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM49BA6NDI0 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.67■□□□□ 0.74
TRIM49BA6NDI0 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM49BA6NDI0 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM49BA6NDI0 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
TRIM49BA6NDI0 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM49BA6NDI0 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.67■□□□□ 0.74
TRIM49BA6NDI0 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM49BA6NDI0 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM49BA6NDI0 HBZP1-201ENST00000354915 429 ntBASIC19.67■□□□□ 0.74
TRIM49BA6NDI0 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.67■□□□□ 0.74
TRIM49BA6NDI0 TSPY5P-201ENST00000426936 936 ntBASIC19.67■□□□□ 0.74
TRIM49BA6NDI0 HYMAI.1-201ENST00000620949 238 ntBASIC19.67■□□□□ 0.74
TRIM49BA6NDI0 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM49BA6NDI0 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM49BA6NDI0 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.67■□□□□ 0.74
TRIM49BA6NDI0 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM49BA6NDI0 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM49BA6NDI0 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.67■□□□□ 0.74
TRIM49BA6NDI0 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM49BA6NDI0 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TRIM49BA6NDI0 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.67■□□□□ 0.74
TRIM49BA6NDI0 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
TRIM49BA6NDI0 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TRIM49BA6NDI0 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM49BA6NDI0 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TRIM49BA6NDI0 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM49BA6NDI0 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM49BA6NDI0 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM49BA6NDI0 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM49BA6NDI0 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM49BA6NDI0 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM49BA6NDI0 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM49BA6NDI0 IGHGP-201ENST00000390555 1178 ntBASIC19.66■□□□□ 0.74
TRIM49BA6NDI0 RNF152P1-201ENST00000397754 604 ntBASIC19.66■□□□□ 0.74
TRIM49BA6NDI0 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM49BA6NDI0 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
TRIM49BA6NDI0 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TRIM49BA6NDI0 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.66■□□□□ 0.74
TRIM49BA6NDI0 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.66■□□□□ 0.74
TRIM49BA6NDI0 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.66■□□□□ 0.74
TRIM49BA6NDI0 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.66■□□□□ 0.74
TRIM49BA6NDI0 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.66■□□□□ 0.74
TRIM49BA6NDI0 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM49BA6NDI0 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TRIM49BA6NDI0 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM49BA6NDI0 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TRIM49BA6NDI0 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM49BA6NDI0 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM49BA6NDI0 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM49BA6NDI0 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM49BA6NDI0 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM49BA6NDI0 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM49BA6NDI0 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.65■□□□□ 0.74
TRIM49BA6NDI0 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM49BA6NDI0 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.65■□□□□ 0.74
TRIM49BA6NDI0 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TRIM49BA6NDI0 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
TRIM49BA6NDI0 MIR662-201ENST00000384847 95 ntBASIC19.65■□□□□ 0.74
TRIM49BA6NDI0 AK4P3-201ENST00000418260 669 ntBASIC19.65■□□□□ 0.74
TRIM49BA6NDI0 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.65■□□□□ 0.74
TRIM49BA6NDI0 AC104076.2-201ENST00000448912 469 ntBASIC19.65■□□□□ 0.74
TRIM49BA6NDI0 AP003733.1-201ENST00000491725 852 ntBASIC19.65■□□□□ 0.74
TRIM49BA6NDI0 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM49BA6NDI0 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.65■□□□□ 0.74
TRIM49BA6NDI0 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.65■□□□□ 0.74
TRIM49BA6NDI0 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.65■□□□□ 0.74
TRIM49BA6NDI0 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.65■□□□□ 0.74
TRIM49BA6NDI0 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.65■□□□□ 0.74
TRIM49BA6NDI0 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.65■□□□□ 0.74
TRIM49BA6NDI0 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.65■□□□□ 0.74
TRIM49BA6NDI0 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.65■□□□□ 0.74
TRIM49BA6NDI0 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms