Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC66A2RUB6 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC66A2RUB6 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CCDC66A2RUB6 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC66A2RUB6 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC66A2RUB6 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC66A2RUB6 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC66A2RUB6 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC66A2RUB6 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC66A2RUB6 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC66A2RUB6 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC66A2RUB6 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC66A2RUB6 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC66A2RUB6 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC66A2RUB6 AC034236.2-201ENST00000606662 1610 ntBASIC19.37■□□□□ 0.69
CCDC66A2RUB6 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CCDC66A2RUB6 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC66A2RUB6 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC66A2RUB6 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC66A2RUB6 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC66A2RUB6 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC66A2RUB6 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CCDC66A2RUB6 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC66A2RUB6 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC66A2RUB6 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC66A2RUB6 CD177P1-201ENST00000606252 935 ntBASIC19.37■□□□□ 0.69
CCDC66A2RUB6 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC66A2RUB6 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC66A2RUB6 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CCDC66A2RUB6 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC66A2RUB6 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC66A2RUB6 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC66A2RUB6 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CCDC66A2RUB6 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC66A2RUB6 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC66A2RUB6 GPAT2P1-201ENST00000444924 1672 ntBASIC19.36■□□□□ 0.69
CCDC66A2RUB6 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC66A2RUB6 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC66A2RUB6 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC66A2RUB6 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CCDC66A2RUB6 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC66A2RUB6 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC66A2RUB6 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC66A2RUB6 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC66A2RUB6 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC66A2RUB6 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CCDC66A2RUB6 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.36■□□□□ 0.69
CCDC66A2RUB6 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC66A2RUB6 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CCDC66A2RUB6 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC66A2RUB6 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CCDC66A2RUB6 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.36■□□□□ 0.69
CCDC66A2RUB6 AC116562.2-201ENST00000507042 360 ntBASIC19.36■□□□□ 0.69
CCDC66A2RUB6 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.36■□□□□ 0.69
CCDC66A2RUB6 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.36■□□□□ 0.69
CCDC66A2RUB6 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC66A2RUB6 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC66A2RUB6 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC66A2RUB6 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC66A2RUB6 PCDHB19P-201ENST00000570871 2371 ntBASIC19.36■□□□□ 0.69
CCDC66A2RUB6 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC66A2RUB6 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CCDC66A2RUB6 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC66A2RUB6 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC66A2RUB6 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC66A2RUB6 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC66A2RUB6 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CCDC66A2RUB6 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC66A2RUB6 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC66A2RUB6 REXO1L9P-201ENST00000604264 2108 ntBASIC19.36■□□□□ 0.69
CCDC66A2RUB6 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC66A2RUB6 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC66A2RUB6 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC66A2RUB6 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CCDC66A2RUB6 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CCDC66A2RUB6 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC66A2RUB6 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC66A2RUB6 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC66A2RUB6 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CCDC66A2RUB6 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC66A2RUB6 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC66A2RUB6 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC66A2RUB6 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC66A2RUB6 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC66A2RUB6 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC66A2RUB6 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC66A2RUB6 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC66A2RUB6 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC66A2RUB6 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CCDC66A2RUB6 MFAP1P1-201ENST00000442257 1255 ntBASIC19.35■□□□□ 0.69
CCDC66A2RUB6 CA15P1-201ENST00000481698 905 ntBASIC19.35■□□□□ 0.69
CCDC66A2RUB6 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC66A2RUB6 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CCDC66A2RUB6 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC66A2RUB6 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CCDC66A2RUB6 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC66A2RUB6 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC66A2RUB6 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CCDC66A2RUB6 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC66A2RUB6 AL121761.2-201ENST00000598007 1648 ntBASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms