Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RNF103-CHMP3A0A140T963 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RNF103-CHMP3A0A140T963 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.25■□□□□ 0.35
RNF103-CHMP3A0A140T963 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF103-CHMP3A0A140T963 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF103-CHMP3A0A140T963 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF103-CHMP3A0A140T963 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF103-CHMP3A0A140T963 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF103-CHMP3A0A140T963 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF103-CHMP3A0A140T963 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF103-CHMP3A0A140T963 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF103-CHMP3A0A140T963 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RNF103-CHMP3A0A140T963 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF103-CHMP3A0A140T963 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.24■□□□□ 0.35
RNF103-CHMP3A0A140T963 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RNF103-CHMP3A0A140T963 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF103-CHMP3A0A140T963 AL096828.2-201ENST00000567259 1965 ntBASIC17.24■□□□□ 0.35
RNF103-CHMP3A0A140T963 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF103-CHMP3A0A140T963 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF103-CHMP3A0A140T963 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
RNF103-CHMP3A0A140T963 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF103-CHMP3A0A140T963 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF103-CHMP3A0A140T963 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF103-CHMP3A0A140T963 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF103-CHMP3A0A140T963 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
RNF103-CHMP3A0A140T963 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.24■□□□□ 0.35
RNF103-CHMP3A0A140T963 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF103-CHMP3A0A140T963 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF103-CHMP3A0A140T963 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF103-CHMP3A0A140T963 C2orf69P3-201ENST00000565542 1120 ntBASIC17.24■□□□□ 0.35
RNF103-CHMP3A0A140T963 WWOX-216ENST00000569818 525 ntBASIC17.24■□□□□ 0.35
RNF103-CHMP3A0A140T963 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.24■□□□□ 0.35
RNF103-CHMP3A0A140T963 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.24■□□□□ 0.35
RNF103-CHMP3A0A140T963 AP006294.2-201ENST00000641667 209 ntBASIC17.24■□□□□ 0.35
RNF103-CHMP3A0A140T963 AC116562.4-202ENST00000641738 218 ntBASIC17.24■□□□□ 0.35
RNF103-CHMP3A0A140T963 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF103-CHMP3A0A140T963 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
RNF103-CHMP3A0A140T963 SDHAP2-201ENST00000455183 2001 ntBASIC17.24■□□□□ 0.35
RNF103-CHMP3A0A140T963 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF103-CHMP3A0A140T963 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.24■□□□□ 0.35
RNF103-CHMP3A0A140T963 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RNF103-CHMP3A0A140T963 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF103-CHMP3A0A140T963 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF103-CHMP3A0A140T963 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF103-CHMP3A0A140T963 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
RNF103-CHMP3A0A140T963 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF103-CHMP3A0A140T963 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF103-CHMP3A0A140T963 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF103-CHMP3A0A140T963 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF103-CHMP3A0A140T963 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF103-CHMP3A0A140T963 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF103-CHMP3A0A140T963 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RNF103-CHMP3A0A140T963 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF103-CHMP3A0A140T963 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF103-CHMP3A0A140T963 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF103-CHMP3A0A140T963 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF103-CHMP3A0A140T963 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RNF103-CHMP3A0A140T963 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF103-CHMP3A0A140T963 KRT8P7-201ENST00000533003 1432 ntBASIC17.23■□□□□ 0.35
RNF103-CHMP3A0A140T963 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF103-CHMP3A0A140T963 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.23■□□□□ 0.35
RNF103-CHMP3A0A140T963 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.23■□□□□ 0.35
RNF103-CHMP3A0A140T963 PHGDH-209ENST00000641074 1780 ntBASIC17.23■□□□□ 0.35
RNF103-CHMP3A0A140T963 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF103-CHMP3A0A140T963 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
RNF103-CHMP3A0A140T963 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF103-CHMP3A0A140T963 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RNF103-CHMP3A0A140T963 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF103-CHMP3A0A140T963 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF103-CHMP3A0A140T963 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF103-CHMP3A0A140T963 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF103-CHMP3A0A140T963 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.23■□□□□ 0.35
RNF103-CHMP3A0A140T963 AL355075.4-201ENST00000554988 638 ntBASIC17.23■□□□□ 0.35
RNF103-CHMP3A0A140T963 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
RNF103-CHMP3A0A140T963 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RNF103-CHMP3A0A140T963 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF103-CHMP3A0A140T963 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF103-CHMP3A0A140T963 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
RNF103-CHMP3A0A140T963 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RNF103-CHMP3A0A140T963 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RNF103-CHMP3A0A140T963 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF103-CHMP3A0A140T963 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RNF103-CHMP3A0A140T963 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RNF103-CHMP3A0A140T963 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RNF103-CHMP3A0A140T963 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RNF103-CHMP3A0A140T963 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RNF103-CHMP3A0A140T963 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF103-CHMP3A0A140T963 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
RNF103-CHMP3A0A140T963 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RNF103-CHMP3A0A140T963 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF103-CHMP3A0A140T963 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RNF103-CHMP3A0A140T963 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF103-CHMP3A0A140T963 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF103-CHMP3A0A140T963 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF103-CHMP3A0A140T963 KRT17P2-201ENST00000300992 1314 ntBASIC17.22■□□□□ 0.35
RNF103-CHMP3A0A140T963 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF103-CHMP3A0A140T963 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF103-CHMP3A0A140T963 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF103-CHMP3A0A140T963 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.22■□□□□ 0.35
RNF103-CHMP3A0A140T963 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms