Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV18A0A075B6X5 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV18A0A075B6X5 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TRAV18A0A075B6X5 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV18A0A075B6X5 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV18A0A075B6X5 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV18A0A075B6X5 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV18A0A075B6X5 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV18A0A075B6X5 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV18A0A075B6X5 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV18A0A075B6X5 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TRAV18A0A075B6X5 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV18A0A075B6X5 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV18A0A075B6X5 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV18A0A075B6X5 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV18A0A075B6X5 B3GAT3P1-201ENST00000471720 806 ntBASIC15.38■□□□□ 0.05
TRAV18A0A075B6X5 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
TRAV18A0A075B6X5 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV18A0A075B6X5 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV18A0A075B6X5 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV18A0A075B6X5 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV18A0A075B6X5 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV18A0A075B6X5 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV18A0A075B6X5 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV18A0A075B6X5 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC15.38■□□□□ 0.05
TRAV18A0A075B6X5 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV18A0A075B6X5 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV18A0A075B6X5 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV18A0A075B6X5 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV18A0A075B6X5 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV18A0A075B6X5 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV18A0A075B6X5 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TRAV18A0A075B6X5 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV18A0A075B6X5 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV18A0A075B6X5 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV18A0A075B6X5 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV18A0A075B6X5 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV18A0A075B6X5 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV18A0A075B6X5 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TRAV18A0A075B6X5 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.37■□□□□ 0.05
TRAV18A0A075B6X5 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV18A0A075B6X5 NFIC-211ENST00000641145 8399 ntBASIC15.37■□□□□ 0.05
TRAV18A0A075B6X5 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV18A0A075B6X5 ISG20-202ENST00000379224 540 ntTSL 3 BASIC15.37■□□□□ 0.05
TRAV18A0A075B6X5 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TRAV18A0A075B6X5 AL353807.1-201ENST00000427475 662 ntBASIC15.37■□□□□ 0.05
TRAV18A0A075B6X5 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.37■□□□□ 0.05
TRAV18A0A075B6X5 DUTP2-201ENST00000519164 463 ntBASIC15.37■□□□□ 0.05
TRAV18A0A075B6X5 AP000692.2-201ENST00000608391 879 ntBASIC15.37■□□□□ 0.05
TRAV18A0A075B6X5 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
TRAV18A0A075B6X5 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TRAV18A0A075B6X5 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.37■□□□□ 0.05
TRAV18A0A075B6X5 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.37■□□□□ 0.05
TRAV18A0A075B6X5 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
TRAV18A0A075B6X5 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
TRAV18A0A075B6X5 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TRAV18A0A075B6X5 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV18A0A075B6X5 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV18A0A075B6X5 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TRAV18A0A075B6X5 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV18A0A075B6X5 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV18A0A075B6X5 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV18A0A075B6X5 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV18A0A075B6X5 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV18A0A075B6X5 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV18A0A075B6X5 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.36■□□□□ 0.05
TRAV18A0A075B6X5 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.36■□□□□ 0.05
TRAV18A0A075B6X5 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV18A0A075B6X5 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV18A0A075B6X5 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV18A0A075B6X5 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV18A0A075B6X5 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV18A0A075B6X5 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV18A0A075B6X5 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV18A0A075B6X5 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV18A0A075B6X5 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
TRAV18A0A075B6X5 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV18A0A075B6X5 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV18A0A075B6X5 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV18A0A075B6X5 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV18A0A075B6X5 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV18A0A075B6X5 KRT18P23-201ENST00000435622 1283 ntBASIC15.36■□□□□ 0.05
TRAV18A0A075B6X5 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TRAV18A0A075B6X5 RNA5SP413-201ENST00000516373 109 ntBASIC15.36■□□□□ 0.05
TRAV18A0A075B6X5 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV18A0A075B6X5 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC15.36■□□□□ 0.05
TRAV18A0A075B6X5 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV18A0A075B6X5 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV18A0A075B6X5 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV18A0A075B6X5 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV18A0A075B6X5 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV18A0A075B6X5 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
TRAV18A0A075B6X5 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
TRAV18A0A075B6X5 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV18A0A075B6X5 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV18A0A075B6X5 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV18A0A075B6X5 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV18A0A075B6X5 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TRAV18A0A075B6X5 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV18A0A075B6X5 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms