Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSNK1G3Q9Y6M4 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSNK1G3Q9Y6M4 SART3-203ENST00000546611 1184 ntBASIC17.47■□□□□ 0.39
CSNK1G3Q9Y6M4 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.47■□□□□ 0.39
CSNK1G3Q9Y6M4 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CSNK1G3Q9Y6M4 AL049840.3-201ENST00000602669 611 ntBASIC17.47■□□□□ 0.39
CSNK1G3Q9Y6M4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.47■□□□□ 0.39
CSNK1G3Q9Y6M4 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.47■□□□□ 0.39
CSNK1G3Q9Y6M4 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSNK1G3Q9Y6M4 ZNF259P1-201ENST00000407656 1365 ntBASIC17.47■□□□□ 0.39
CSNK1G3Q9Y6M4 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CSNK1G3Q9Y6M4 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.47■□□□□ 0.39
CSNK1G3Q9Y6M4 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSNK1G3Q9Y6M4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CSNK1G3Q9Y6M4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.47■□□□□ 0.39
CSNK1G3Q9Y6M4 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSNK1G3Q9Y6M4 AC007613.1-201ENST00000572811 2597 ntBASIC17.47■□□□□ 0.39
CSNK1G3Q9Y6M4 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CSNK1G3Q9Y6M4 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CSNK1G3Q9Y6M4 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSNK1G3Q9Y6M4 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
CSNK1G3Q9Y6M4 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.47■□□□□ 0.39
CSNK1G3Q9Y6M4 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSNK1G3Q9Y6M4 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.46■□□□□ 0.39
CSNK1G3Q9Y6M4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CSNK1G3Q9Y6M4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CSNK1G3Q9Y6M4 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.46■□□□□ 0.39
CSNK1G3Q9Y6M4 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CSNK1G3Q9Y6M4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CSNK1G3Q9Y6M4 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.46■□□□□ 0.39
CSNK1G3Q9Y6M4 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.46■□□□□ 0.39
CSNK1G3Q9Y6M4 AC116407.3-201ENST00000623905 1129 ntBASIC17.46■□□□□ 0.39
CSNK1G3Q9Y6M4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CSNK1G3Q9Y6M4 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CSNK1G3Q9Y6M4 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CSNK1G3Q9Y6M4 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CSNK1G3Q9Y6M4 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.46■□□□□ 0.39
CSNK1G3Q9Y6M4 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CSNK1G3Q9Y6M4 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CSNK1G3Q9Y6M4 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.46■□□□□ 0.39
CSNK1G3Q9Y6M4 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CSNK1G3Q9Y6M4 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CSNK1G3Q9Y6M4 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSNK1G3Q9Y6M4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSNK1G3Q9Y6M4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CSNK1G3Q9Y6M4 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.45■□□□□ 0.38
CSNK1G3Q9Y6M4 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.45■□□□□ 0.38
CSNK1G3Q9Y6M4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.45■□□□□ 0.38
CSNK1G3Q9Y6M4 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSNK1G3Q9Y6M4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSNK1G3Q9Y6M4 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CSNK1G3Q9Y6M4 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CSNK1G3Q9Y6M4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.45■□□□□ 0.38
CSNK1G3Q9Y6M4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CSNK1G3Q9Y6M4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSNK1G3Q9Y6M4 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.45■□□□□ 0.38
CSNK1G3Q9Y6M4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CSNK1G3Q9Y6M4 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CSNK1G3Q9Y6M4 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.45■□□□□ 0.38
CSNK1G3Q9Y6M4 AC096633.1-201ENST00000422446 749 ntBASIC17.45■□□□□ 0.38
CSNK1G3Q9Y6M4 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.45■□□□□ 0.38
CSNK1G3Q9Y6M4 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.45■□□□□ 0.38
CSNK1G3Q9Y6M4 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSNK1G3Q9Y6M4 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.45■□□□□ 0.38
CSNK1G3Q9Y6M4 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.45■□□□□ 0.38
CSNK1G3Q9Y6M4 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.45■□□□□ 0.38
CSNK1G3Q9Y6M4 AP000867.4-201ENST00000641616 219 ntBASIC17.45■□□□□ 0.38
CSNK1G3Q9Y6M4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CSNK1G3Q9Y6M4 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSNK1G3Q9Y6M4 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CSNK1G3Q9Y6M4 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSNK1G3Q9Y6M4 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CSNK1G3Q9Y6M4 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CSNK1G3Q9Y6M4 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CSNK1G3Q9Y6M4 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.45■□□□□ 0.38
CSNK1G3Q9Y6M4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSNK1G3Q9Y6M4 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CSNK1G3Q9Y6M4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSNK1G3Q9Y6M4 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
CSNK1G3Q9Y6M4 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1G3Q9Y6M4 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1G3Q9Y6M4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1G3Q9Y6M4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.44■□□□□ 0.38
CSNK1G3Q9Y6M4 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1G3Q9Y6M4 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1G3Q9Y6M4 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.44■□□□□ 0.38
CSNK1G3Q9Y6M4 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1G3Q9Y6M4 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1G3Q9Y6M4 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CSNK1G3Q9Y6M4 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.44■□□□□ 0.38
CSNK1G3Q9Y6M4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.44■□□□□ 0.38
CSNK1G3Q9Y6M4 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1G3Q9Y6M4 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.44■□□□□ 0.38
CSNK1G3Q9Y6M4 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.44■□□□□ 0.38
CSNK1G3Q9Y6M4 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.44■□□□□ 0.38
CSNK1G3Q9Y6M4 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.44■□□□□ 0.38
CSNK1G3Q9Y6M4 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1G3Q9Y6M4 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CSNK1G3Q9Y6M4 AC132938.6-201ENST00000623828 1655 ntBASIC17.44■□□□□ 0.38
CSNK1G3Q9Y6M4 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms