Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 AL096828.2-201ENST00000567259 1965 ntBASIC16.52■□□□□ 0.24
HRH3Q9Y5N1 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HRH3Q9Y5N1 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
HRH3Q9Y5N1 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.52■□□□□ 0.24
HRH3Q9Y5N1 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
HRH3Q9Y5N1 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HRH3Q9Y5N1 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
HRH3Q9Y5N1 AC111152.3-201ENST00000569699 673 ntBASIC16.52■□□□□ 0.24
HRH3Q9Y5N1 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.52■□□□□ 0.24
HRH3Q9Y5N1 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HRH3Q9Y5N1 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.52■□□□□ 0.24
HRH3Q9Y5N1 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HRH3Q9Y5N1 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HRH3Q9Y5N1 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
HRH3Q9Y5N1 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HRH3Q9Y5N1 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.52■□□□□ 0.23
HRH3Q9Y5N1 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
HRH3Q9Y5N1 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
HRH3Q9Y5N1 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HRH3Q9Y5N1 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HRH3Q9Y5N1 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HRH3Q9Y5N1 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.52■□□□□ 0.23
HRH3Q9Y5N1 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.52■□□□□ 0.23
HRH3Q9Y5N1 AC093010.1-201ENST00000473625 1624 ntBASIC16.52■□□□□ 0.23
HRH3Q9Y5N1 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
HRH3Q9Y5N1 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
HRH3Q9Y5N1 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
HRH3Q9Y5N1 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
HRH3Q9Y5N1 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.51■□□□□ 0.23
HRH3Q9Y5N1 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.51■□□□□ 0.23
HRH3Q9Y5N1 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HRH3Q9Y5N1 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.51■□□□□ 0.23
HRH3Q9Y5N1 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
HRH3Q9Y5N1 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.51■□□□□ 0.23
HRH3Q9Y5N1 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
HRH3Q9Y5N1 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.51■□□□□ 0.23
HRH3Q9Y5N1 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.51■□□□□ 0.23
HRH3Q9Y5N1 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HRH3Q9Y5N1 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.51■□□□□ 0.23
HRH3Q9Y5N1 AC113404.2-201ENST00000507884 177 ntBASIC16.51■□□□□ 0.23
HRH3Q9Y5N1 FOSL1P1-201ENST00000511041 816 ntBASIC16.51■□□□□ 0.23
HRH3Q9Y5N1 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.51■□□□□ 0.23
HRH3Q9Y5N1 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
HRH3Q9Y5N1 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HRH3Q9Y5N1 IFNL4P1-201ENST00000607083 540 ntBASIC16.51■□□□□ 0.23
HRH3Q9Y5N1 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HRH3Q9Y5N1 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.51■□□□□ 0.23
HRH3Q9Y5N1 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.51■□□□□ 0.23
HRH3Q9Y5N1 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.51■□□□□ 0.23
HRH3Q9Y5N1 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HRH3Q9Y5N1 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HRH3Q9Y5N1 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.51■□□□□ 0.23
HRH3Q9Y5N1 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HRH3Q9Y5N1 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HRH3Q9Y5N1 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
HRH3Q9Y5N1 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.51■□□□□ 0.23
HRH3Q9Y5N1 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HRH3Q9Y5N1 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HRH3Q9Y5N1 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HRH3Q9Y5N1 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HRH3Q9Y5N1 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HRH3Q9Y5N1 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HRH3Q9Y5N1 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HRH3Q9Y5N1 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HRH3Q9Y5N1 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.51■□□□□ 0.23
HRH3Q9Y5N1 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
HRH3Q9Y5N1 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HRH3Q9Y5N1 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.5■□□□□ 0.23
HRH3Q9Y5N1 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HRH3Q9Y5N1 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HRH3Q9Y5N1 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
HRH3Q9Y5N1 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
HRH3Q9Y5N1 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
HRH3Q9Y5N1 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HRH3Q9Y5N1 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
HRH3Q9Y5N1 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
HRH3Q9Y5N1 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HRH3Q9Y5N1 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HRH3Q9Y5N1 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.5■□□□□ 0.23
HRH3Q9Y5N1 AC004870.1-201ENST00000315132 882 ntBASIC16.5■□□□□ 0.23
HRH3Q9Y5N1 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.5■□□□□ 0.23
HRH3Q9Y5N1 RN7SL606P-201ENST00000472779 293 ntBASIC16.5■□□□□ 0.23
HRH3Q9Y5N1 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HRH3Q9Y5N1 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HRH3Q9Y5N1 AL592071.1-201ENST00000611956 408 ntBASIC16.5■□□□□ 0.23
HRH3Q9Y5N1 IGHV3-41-201ENST00000613121 348 ntBASIC16.5■□□□□ 0.23
HRH3Q9Y5N1 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.5■□□□□ 0.23
HRH3Q9Y5N1 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HRH3Q9Y5N1 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HRH3Q9Y5N1 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HRH3Q9Y5N1 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
HRH3Q9Y5N1 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HRH3Q9Y5N1 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HRH3Q9Y5N1 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.5■□□□□ 0.23
HRH3Q9Y5N1 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.5■□□□□ 0.23
HRH3Q9Y5N1 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HRH3Q9Y5N1 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.49■□□□□ 0.23
HRH3Q9Y5N1 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.49■□□□□ 0.23
HRH3Q9Y5N1 BICD1-207ENST00000551848 1962 ntBASIC16.49■□□□□ 0.23
HRH3Q9Y5N1 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms