Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHB11Q9Y5F2 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHB11Q9Y5F2 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHB11Q9Y5F2 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHB11Q9Y5F2 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHB11Q9Y5F2 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHB11Q9Y5F2 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHB11Q9Y5F2 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDHB11Q9Y5F2 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.52■□□□□ 0.4
PCDHB11Q9Y5F2 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHB11Q9Y5F2 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHB11Q9Y5F2 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHB11Q9Y5F2 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHB11Q9Y5F2 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHB11Q9Y5F2 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHB11Q9Y5F2 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHB11Q9Y5F2 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHB11Q9Y5F2 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHB11Q9Y5F2 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHB11Q9Y5F2 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.52■□□□□ 0.4
PCDHB11Q9Y5F2 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHB11Q9Y5F2 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDHB11Q9Y5F2 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHB11Q9Y5F2 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDHB11Q9Y5F2 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDHB11Q9Y5F2 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PCDHB11Q9Y5F2 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHB11Q9Y5F2 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
PCDHB11Q9Y5F2 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDHB11Q9Y5F2 AC008764.6-201ENST00000595909 2069 ntBASIC17.52■□□□□ 0.39
PCDHB11Q9Y5F2 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHB11Q9Y5F2 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHB11Q9Y5F2 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.39
PCDHB11Q9Y5F2 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHB11Q9Y5F2 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHB11Q9Y5F2 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.52■□□□□ 0.39
PCDHB11Q9Y5F2 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.52■□□□□ 0.39
PCDHB11Q9Y5F2 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHB11Q9Y5F2 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.52■□□□□ 0.39
PCDHB11Q9Y5F2 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHB11Q9Y5F2 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.52■□□□□ 0.39
PCDHB11Q9Y5F2 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHB11Q9Y5F2 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB11Q9Y5F2 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHB11Q9Y5F2 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHB11Q9Y5F2 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB11Q9Y5F2 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB11Q9Y5F2 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB11Q9Y5F2 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB11Q9Y5F2 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB11Q9Y5F2 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB11Q9Y5F2 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
PCDHB11Q9Y5F2 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB11Q9Y5F2 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHB11Q9Y5F2 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHB11Q9Y5F2 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
PCDHB11Q9Y5F2 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
PCDHB11Q9Y5F2 AC099336.1-202ENST00000602961 463 ntBASIC17.51■□□□□ 0.39
PCDHB11Q9Y5F2 AC104692.2-201ENST00000603054 253 ntBASIC17.51■□□□□ 0.39
PCDHB11Q9Y5F2 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PCDHB11Q9Y5F2 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHB11Q9Y5F2 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB11Q9Y5F2 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHB11Q9Y5F2 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PCDHB11Q9Y5F2 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHB11Q9Y5F2 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PCDHB11Q9Y5F2 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB11Q9Y5F2 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PCDHB11Q9Y5F2 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
PCDHB11Q9Y5F2 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.51■□□□□ 0.39
PCDHB11Q9Y5F2 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB11Q9Y5F2 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB11Q9Y5F2 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB11Q9Y5F2 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB11Q9Y5F2 AC093010.1-201ENST00000473625 1624 ntBASIC17.5■□□□□ 0.39
PCDHB11Q9Y5F2 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB11Q9Y5F2 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHB11Q9Y5F2 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB11Q9Y5F2 AL096828.2-201ENST00000567259 1965 ntBASIC17.5■□□□□ 0.39
PCDHB11Q9Y5F2 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB11Q9Y5F2 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB11Q9Y5F2 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB11Q9Y5F2 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHB11Q9Y5F2 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.5■□□□□ 0.39
PCDHB11Q9Y5F2 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.5■□□□□ 0.39
PCDHB11Q9Y5F2 AC079781.3-201ENST00000449110 356 ntBASIC17.5■□□□□ 0.39
PCDHB11Q9Y5F2 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
PCDHB11Q9Y5F2 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.5■□□□□ 0.39
PCDHB11Q9Y5F2 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHB11Q9Y5F2 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.5■□□□□ 0.39
PCDHB11Q9Y5F2 AL121912.1-201ENST00000603683 238 ntBASIC17.5■□□□□ 0.39
PCDHB11Q9Y5F2 AL353801.3-201ENST00000609898 542 ntBASIC17.5■□□□□ 0.39
PCDHB11Q9Y5F2 AC004263.2-201ENST00000617183 678 ntBASIC17.5■□□□□ 0.39
PCDHB11Q9Y5F2 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.5■□□□□ 0.39
PCDHB11Q9Y5F2 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PCDHB11Q9Y5F2 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
PCDHB11Q9Y5F2 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB11Q9Y5F2 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB11Q9Y5F2 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB11Q9Y5F2 AC090340.1-201ENST00000620778 4980 ntBASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms