Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RHBDD3Q9Y3P4 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RHBDD3Q9Y3P4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RHBDD3Q9Y3P4 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.69■□□□□ 0.1
RHBDD3Q9Y3P4 SLC25A3P1-201ENST00000443844 931 ntBASIC15.69■□□□□ 0.1
RHBDD3Q9Y3P4 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RHBDD3Q9Y3P4 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RHBDD3Q9Y3P4 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.69■□□□□ 0.1
RHBDD3Q9Y3P4 AC141257.4-201ENST00000634557 245 ntBASIC15.69■□□□□ 0.1
RHBDD3Q9Y3P4 AC136944.6-201ENST00000634818 245 ntBASIC15.69■□□□□ 0.1
RHBDD3Q9Y3P4 AC133561.5-201ENST00000635547 218 ntBASIC15.69■□□□□ 0.1
RHBDD3Q9Y3P4 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RHBDD3Q9Y3P4 AC080080.1-201ENST00000625121 2420 ntBASIC15.69■□□□□ 0.1
RHBDD3Q9Y3P4 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RHBDD3Q9Y3P4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.69■□□□□ 0.1
RHBDD3Q9Y3P4 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RHBDD3Q9Y3P4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RHBDD3Q9Y3P4 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.69■□□□□ 0.1
RHBDD3Q9Y3P4 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.69■□□□□ 0.1
RHBDD3Q9Y3P4 AC009053.2-201ENST00000563701 2365 ntBASIC15.69■□□□□ 0.1
RHBDD3Q9Y3P4 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
RHBDD3Q9Y3P4 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RHBDD3Q9Y3P4 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RHBDD3Q9Y3P4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RHBDD3Q9Y3P4 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.68■□□□□ 0.1
RHBDD3Q9Y3P4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
RHBDD3Q9Y3P4 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RHBDD3Q9Y3P4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.68■□□□□ 0.1
RHBDD3Q9Y3P4 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.68■□□□□ 0.1
RHBDD3Q9Y3P4 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RHBDD3Q9Y3P4 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RHBDD3Q9Y3P4 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RHBDD3Q9Y3P4 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RHBDD3Q9Y3P4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RHBDD3Q9Y3P4 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
RHBDD3Q9Y3P4 AL024508.2-201ENST00000607749 1894 ntBASIC15.68■□□□□ 0.1
RHBDD3Q9Y3P4 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC15.68■□□□□ 0.1
RHBDD3Q9Y3P4 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.68■□□□□ 0.1
RHBDD3Q9Y3P4 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RHBDD3Q9Y3P4 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RHBDD3Q9Y3P4 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RHBDD3Q9Y3P4 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
RHBDD3Q9Y3P4 AP000523.1-201ENST00000398242 1049 ntBASIC15.68■□□□□ 0.1
RHBDD3Q9Y3P4 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC15.68■□□□□ 0.1
RHBDD3Q9Y3P4 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RHBDD3Q9Y3P4 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RHBDD3Q9Y3P4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC15.68■□□□□ 0.1
RHBDD3Q9Y3P4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC15.68■□□□□ 0.1
RHBDD3Q9Y3P4 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RHBDD3Q9Y3P4 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RHBDD3Q9Y3P4 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RHBDD3Q9Y3P4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RHBDD3Q9Y3P4 AL138966.2-201ENST00000621997 464 ntBASIC15.68■□□□□ 0.1
RHBDD3Q9Y3P4 AC073912.3-201ENST00000624414 853 ntBASIC15.68■□□□□ 0.1
RHBDD3Q9Y3P4 AC092865.7-201ENST00000641832 219 ntBASIC15.68■□□□□ 0.1
RHBDD3Q9Y3P4 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RHBDD3Q9Y3P4 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
RHBDD3Q9Y3P4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.68■□□□□ 0.1
RHBDD3Q9Y3P4 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RHBDD3Q9Y3P4 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RHBDD3Q9Y3P4 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.68■□□□□ 0.1
RHBDD3Q9Y3P4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.68■□□□□ 0.1
RHBDD3Q9Y3P4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.67■□□□□ 0.1
RHBDD3Q9Y3P4 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
RHBDD3Q9Y3P4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.67■□□□□ 0.1
RHBDD3Q9Y3P4 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RHBDD3Q9Y3P4 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RHBDD3Q9Y3P4 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RHBDD3Q9Y3P4 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
RHBDD3Q9Y3P4 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RHBDD3Q9Y3P4 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RHBDD3Q9Y3P4 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.67■□□□□ 0.1
RHBDD3Q9Y3P4 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RHBDD3Q9Y3P4 MIR3917-201ENST00000580971 93 ntBASIC15.67■□□□□ 0.1
RHBDD3Q9Y3P4 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.67■□□□□ 0.1
RHBDD3Q9Y3P4 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RHBDD3Q9Y3P4 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.67■□□□□ 0.1
RHBDD3Q9Y3P4 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RHBDD3Q9Y3P4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RHBDD3Q9Y3P4 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RHBDD3Q9Y3P4 AC141586.5-201ENST00000624546 2050 ntBASIC15.67■□□□□ 0.1
RHBDD3Q9Y3P4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RHBDD3Q9Y3P4 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RHBDD3Q9Y3P4 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RHBDD3Q9Y3P4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.67■□□□□ 0.1
RHBDD3Q9Y3P4 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RHBDD3Q9Y3P4 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RHBDD3Q9Y3P4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.67■□□□□ 0.1
RHBDD3Q9Y3P4 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
RHBDD3Q9Y3P4 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC15.67■□□□□ 0.1
RHBDD3Q9Y3P4 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RHBDD3Q9Y3P4 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RHBDD3Q9Y3P4 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RHBDD3Q9Y3P4 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RHBDD3Q9Y3P4 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RHBDD3Q9Y3P4 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RHBDD3Q9Y3P4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RHBDD3Q9Y3P4 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RHBDD3Q9Y3P4 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RHBDD3Q9Y3P4 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms