Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.42■□□□□ 0.06
MRPS28Q9Y2Q9 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.42■□□□□ 0.06
MRPS28Q9Y2Q9 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.42■□□□□ 0.06
MRPS28Q9Y2Q9 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.42■□□□□ 0.06
MRPS28Q9Y2Q9 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MRPS28Q9Y2Q9 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MRPS28Q9Y2Q9 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.41■□□□□ 0.06
MRPS28Q9Y2Q9 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MRPS28Q9Y2Q9 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MRPS28Q9Y2Q9 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.41■□□□□ 0.06
MRPS28Q9Y2Q9 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MRPS28Q9Y2Q9 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
MRPS28Q9Y2Q9 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
MRPS28Q9Y2Q9 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MRPS28Q9Y2Q9 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MRPS28Q9Y2Q9 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
MRPS28Q9Y2Q9 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.41■□□□□ 0.06
MRPS28Q9Y2Q9 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MRPS28Q9Y2Q9 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.41■□□□□ 0.06
MRPS28Q9Y2Q9 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MRPS28Q9Y2Q9 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC15.41■□□□□ 0.06
MRPS28Q9Y2Q9 C2orf69P3-201ENST00000565542 1120 ntBASIC15.41■□□□□ 0.06
MRPS28Q9Y2Q9 AC008687.5-201ENST00000593746 558 ntBASIC15.41■□□□□ 0.06
MRPS28Q9Y2Q9 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MRPS28Q9Y2Q9 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
MRPS28Q9Y2Q9 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MRPS28Q9Y2Q9 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.41■□□□□ 0.06
MRPS28Q9Y2Q9 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
MRPS28Q9Y2Q9 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
MRPS28Q9Y2Q9 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
MRPS28Q9Y2Q9 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MRPS28Q9Y2Q9 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.41■□□□□ 0.06
MRPS28Q9Y2Q9 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
MRPS28Q9Y2Q9 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
MRPS28Q9Y2Q9 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC15.41■□□□□ 0.06
MRPS28Q9Y2Q9 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MRPS28Q9Y2Q9 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.41■□□□□ 0.06
MRPS28Q9Y2Q9 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.41■□□□□ 0.06
MRPS28Q9Y2Q9 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.4■□□□□ 0.06
MRPS28Q9Y2Q9 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.4■□□□□ 0.06
MRPS28Q9Y2Q9 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MRPS28Q9Y2Q9 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
MRPS28Q9Y2Q9 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.4■□□□□ 0.06
MRPS28Q9Y2Q9 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MRPS28Q9Y2Q9 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
MRPS28Q9Y2Q9 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
MRPS28Q9Y2Q9 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.4■□□□□ 0.06
MRPS28Q9Y2Q9 AD000864.1-201ENST00000624076 2295 ntBASIC15.4■□□□□ 0.06
MRPS28Q9Y2Q9 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
MRPS28Q9Y2Q9 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MRPS28Q9Y2Q9 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
MRPS28Q9Y2Q9 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
MRPS28Q9Y2Q9 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MRPS28Q9Y2Q9 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MRPS28Q9Y2Q9 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MRPS28Q9Y2Q9 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
MRPS28Q9Y2Q9 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
MRPS28Q9Y2Q9 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MRPS28Q9Y2Q9 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MRPS28Q9Y2Q9 AL390955.1-201ENST00000428694 934 ntBASIC15.4■□□□□ 0.06
MRPS28Q9Y2Q9 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.4■□□□□ 0.06
MRPS28Q9Y2Q9 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.4■□□□□ 0.06
MRPS28Q9Y2Q9 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.4■□□□□ 0.06
MRPS28Q9Y2Q9 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.4■□□□□ 0.06
MRPS28Q9Y2Q9 FITM1-202ENST00000559294 800 ntBASIC15.4■□□□□ 0.06
MRPS28Q9Y2Q9 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC15.4■□□□□ 0.06
MRPS28Q9Y2Q9 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MRPS28Q9Y2Q9 Z99916.2-201ENST00000604037 246 ntBASIC15.4■□□□□ 0.06
MRPS28Q9Y2Q9 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC15.4■□□□□ 0.06
MRPS28Q9Y2Q9 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC15.4■□□□□ 0.06
MRPS28Q9Y2Q9 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MRPS28Q9Y2Q9 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
MRPS28Q9Y2Q9 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MRPS28Q9Y2Q9 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
MRPS28Q9Y2Q9 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.4■□□□□ 0.06
MRPS28Q9Y2Q9 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
MRPS28Q9Y2Q9 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MRPS28Q9Y2Q9 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
MRPS28Q9Y2Q9 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MRPS28Q9Y2Q9 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MRPS28Q9Y2Q9 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MRPS28Q9Y2Q9 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.06
MRPS28Q9Y2Q9 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.06
MRPS28Q9Y2Q9 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.39■□□□□ 0.05
MRPS28Q9Y2Q9 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MRPS28Q9Y2Q9 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.39■□□□□ 0.05
MRPS28Q9Y2Q9 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MRPS28Q9Y2Q9 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MRPS28Q9Y2Q9 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.39■□□□□ 0.05
MRPS28Q9Y2Q9 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MRPS28Q9Y2Q9 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
MRPS28Q9Y2Q9 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.39■□□□□ 0.05
MRPS28Q9Y2Q9 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MRPS28Q9Y2Q9 LINC00602-201ENST00000629776 2065 ntBASIC15.39■□□□□ 0.05
MRPS28Q9Y2Q9 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
MRPS28Q9Y2Q9 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MRPS28Q9Y2Q9 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MRPS28Q9Y2Q9 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC15.39■□□□□ 0.05
MRPS28Q9Y2Q9 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MRPS28Q9Y2Q9 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms