Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRCH1Q9Y2L9 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.02■□□□□ 0.32
LRCH1Q9Y2L9 YBX1P10-201ENST00000444752 975 ntBASIC17.02■□□□□ 0.32
LRCH1Q9Y2L9 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.02■□□□□ 0.32
LRCH1Q9Y2L9 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.02■□□□□ 0.32
LRCH1Q9Y2L9 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.02■□□□□ 0.32
LRCH1Q9Y2L9 AC083880.1-201ENST00000608266 535 ntBASIC17.02■□□□□ 0.32
LRCH1Q9Y2L9 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRCH1Q9Y2L9 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.02■□□□□ 0.32
LRCH1Q9Y2L9 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
LRCH1Q9Y2L9 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
LRCH1Q9Y2L9 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
LRCH1Q9Y2L9 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
LRCH1Q9Y2L9 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LRCH1Q9Y2L9 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LRCH1Q9Y2L9 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
LRCH1Q9Y2L9 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
LRCH1Q9Y2L9 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
LRCH1Q9Y2L9 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
LRCH1Q9Y2L9 TSPY26P-202ENST00000565928 3884 ntBASIC17.01■□□□□ 0.31
LRCH1Q9Y2L9 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRCH1Q9Y2L9 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRCH1Q9Y2L9 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRCH1Q9Y2L9 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRCH1Q9Y2L9 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRCH1Q9Y2L9 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
LRCH1Q9Y2L9 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
LRCH1Q9Y2L9 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
LRCH1Q9Y2L9 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRCH1Q9Y2L9 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRCH1Q9Y2L9 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.01■□□□□ 0.31
LRCH1Q9Y2L9 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRCH1Q9Y2L9 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.01■□□□□ 0.31
LRCH1Q9Y2L9 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRCH1Q9Y2L9 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRCH1Q9Y2L9 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRCH1Q9Y2L9 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRCH1Q9Y2L9 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.01■□□□□ 0.31
LRCH1Q9Y2L9 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.01■□□□□ 0.31
LRCH1Q9Y2L9 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.01■□□□□ 0.31
LRCH1Q9Y2L9 RNA5SP413-201ENST00000516373 109 ntBASIC17.01■□□□□ 0.31
LRCH1Q9Y2L9 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.01■□□□□ 0.31
LRCH1Q9Y2L9 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.01■□□□□ 0.31
LRCH1Q9Y2L9 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.01■□□□□ 0.31
LRCH1Q9Y2L9 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.01■□□□□ 0.31
LRCH1Q9Y2L9 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRCH1Q9Y2L9 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRCH1Q9Y2L9 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRCH1Q9Y2L9 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRCH1Q9Y2L9 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRCH1Q9Y2L9 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRCH1Q9Y2L9 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRCH1Q9Y2L9 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
LRCH1Q9Y2L9 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRCH1Q9Y2L9 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
LRCH1Q9Y2L9 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRCH1Q9Y2L9 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
LRCH1Q9Y2L9 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
LRCH1Q9Y2L9 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRCH1Q9Y2L9 CYP2T1P-202ENST00000641596 2535 ntBASIC17■□□□□ 0.31
LRCH1Q9Y2L9 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
LRCH1Q9Y2L9 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
LRCH1Q9Y2L9 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRCH1Q9Y2L9 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRCH1Q9Y2L9 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRCH1Q9Y2L9 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
LRCH1Q9Y2L9 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRCH1Q9Y2L9 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRCH1Q9Y2L9 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRCH1Q9Y2L9 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17■□□□□ 0.31
LRCH1Q9Y2L9 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
LRCH1Q9Y2L9 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17■□□□□ 0.31
LRCH1Q9Y2L9 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
LRCH1Q9Y2L9 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRCH1Q9Y2L9 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17■□□□□ 0.31
LRCH1Q9Y2L9 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
LRCH1Q9Y2L9 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17■□□□□ 0.31
LRCH1Q9Y2L9 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17■□□□□ 0.31
LRCH1Q9Y2L9 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRCH1Q9Y2L9 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRCH1Q9Y2L9 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
LRCH1Q9Y2L9 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRCH1Q9Y2L9 BID-213ENST00000615414 2236 ntTSL 5 BASIC17■□□□□ 0.31
LRCH1Q9Y2L9 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRCH1Q9Y2L9 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
LRCH1Q9Y2L9 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRCH1Q9Y2L9 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRCH1Q9Y2L9 AL513523.2-202ENST00000427283 2040 ntBASIC16.99■□□□□ 0.31
LRCH1Q9Y2L9 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.99■□□□□ 0.31
LRCH1Q9Y2L9 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.99■□□□□ 0.31
LRCH1Q9Y2L9 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRCH1Q9Y2L9 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
LRCH1Q9Y2L9 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
LRCH1Q9Y2L9 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
LRCH1Q9Y2L9 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRCH1Q9Y2L9 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRCH1Q9Y2L9 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRCH1Q9Y2L9 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.99■□□□□ 0.31
LRCH1Q9Y2L9 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRCH1Q9Y2L9 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 170.3 ms