Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
NINLQ9Y2I6 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
NINLQ9Y2I6 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC24.34■■□□□ 1.49
NINLQ9Y2I6 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC24.34■■□□□ 1.49
NINLQ9Y2I6 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
NINLQ9Y2I6 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
NINLQ9Y2I6 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC24.34■■□□□ 1.49
NINLQ9Y2I6 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
NINLQ9Y2I6 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC24.34■■□□□ 1.49
NINLQ9Y2I6 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
NINLQ9Y2I6 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC24.34■■□□□ 1.49
NINLQ9Y2I6 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC24.34■■□□□ 1.49
NINLQ9Y2I6 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC24.34■■□□□ 1.49
NINLQ9Y2I6 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC24.34■■□□□ 1.49
NINLQ9Y2I6 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC24.34■■□□□ 1.49
NINLQ9Y2I6 IGHV3-22-201ENST00000520721 359 ntBASIC24.34■■□□□ 1.49
NINLQ9Y2I6 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC24.34■■□□□ 1.49
NINLQ9Y2I6 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
NINLQ9Y2I6 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC24.34■■□□□ 1.49
NINLQ9Y2I6 AC145285.3-201ENST00000564603 959 ntBASIC24.34■■□□□ 1.49
NINLQ9Y2I6 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC24.34■■□□□ 1.49
NINLQ9Y2I6 AL691403.2-201ENST00000618460 490 ntBASIC24.34■■□□□ 1.49
NINLQ9Y2I6 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC24.34■■□□□ 1.49
NINLQ9Y2I6 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
NINLQ9Y2I6 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
NINLQ9Y2I6 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC24.34■■□□□ 1.49
NINLQ9Y2I6 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
NINLQ9Y2I6 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC24.34■■□□□ 1.49
NINLQ9Y2I6 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
NINLQ9Y2I6 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
NINLQ9Y2I6 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
NINLQ9Y2I6 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
NINLQ9Y2I6 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
NINLQ9Y2I6 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
NINLQ9Y2I6 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
NINLQ9Y2I6 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC24.33■■□□□ 1.49
NINLQ9Y2I6 MSRA-206ENST00000521209 814 ntTSL 3 BASIC24.33■■□□□ 1.49
NINLQ9Y2I6 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
NINLQ9Y2I6 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC24.33■■□□□ 1.49
NINLQ9Y2I6 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
NINLQ9Y2I6 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
NINLQ9Y2I6 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC24.33■■□□□ 1.49
NINLQ9Y2I6 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC24.33■■□□□ 1.49
NINLQ9Y2I6 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC24.33■■□□□ 1.49
NINLQ9Y2I6 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
NINLQ9Y2I6 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC24.33■■□□□ 1.49
NINLQ9Y2I6 HLA-J-201ENST00000462773 1622 ntBASIC24.33■■□□□ 1.49
NINLQ9Y2I6 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC24.33■■□□□ 1.49
NINLQ9Y2I6 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC24.32■■□□□ 1.48
NINLQ9Y2I6 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC24.32■■□□□ 1.48
NINLQ9Y2I6 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC24.32■■□□□ 1.48
NINLQ9Y2I6 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
NINLQ9Y2I6 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
NINLQ9Y2I6 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC24.32■■□□□ 1.48
NINLQ9Y2I6 PMS2P7-201ENST00000506558 1336 ntBASIC24.32■■□□□ 1.48
NINLQ9Y2I6 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
NINLQ9Y2I6 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC24.32■■□□□ 1.48
NINLQ9Y2I6 AC003669.1-201ENST00000334569 611 ntBASIC24.32■■□□□ 1.48
NINLQ9Y2I6 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC24.32■■□□□ 1.48
NINLQ9Y2I6 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
NINLQ9Y2I6 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
NINLQ9Y2I6 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC24.32■■□□□ 1.48
NINLQ9Y2I6 KRT18P27-201ENST00000427733 1299 ntBASIC24.32■■□□□ 1.48
NINLQ9Y2I6 AC002558.1-201ENST00000488906 803 ntBASIC24.32■■□□□ 1.48
NINLQ9Y2I6 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
NINLQ9Y2I6 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
NINLQ9Y2I6 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC24.32■■□□□ 1.48
NINLQ9Y2I6 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
NINLQ9Y2I6 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
NINLQ9Y2I6 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
NINLQ9Y2I6 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
NINLQ9Y2I6 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
NINLQ9Y2I6 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
NINLQ9Y2I6 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
NINLQ9Y2I6 AC009949.1-201ENST00000623048 1830 ntBASIC24.32■■□□□ 1.48
NINLQ9Y2I6 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
NINLQ9Y2I6 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC24.32■■□□□ 1.48
NINLQ9Y2I6 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
NINLQ9Y2I6 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
NINLQ9Y2I6 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
NINLQ9Y2I6 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC24.31■■□□□ 1.48
NINLQ9Y2I6 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
NINLQ9Y2I6 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC24.31■■□□□ 1.48
NINLQ9Y2I6 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC24.31■■□□□ 1.48
NINLQ9Y2I6 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC24.31■■□□□ 1.48
NINLQ9Y2I6 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC24.31■■□□□ 1.48
NINLQ9Y2I6 POLD2P1-201ENST00000511220 997 ntBASIC24.31■■□□□ 1.48
NINLQ9Y2I6 CD63-204ENST00000546939 779 ntTSL 3 BASIC24.31■■□□□ 1.48
NINLQ9Y2I6 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC24.31■■□□□ 1.48
NINLQ9Y2I6 ETFA-208ENST00000559602 792 ntTSL 3 BASIC24.31■■□□□ 1.48
NINLQ9Y2I6 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC24.31■■□□□ 1.48
NINLQ9Y2I6 AC132938.5-201ENST00000624980 1813 ntBASIC24.31■■□□□ 1.48
NINLQ9Y2I6 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
NINLQ9Y2I6 RNF165-205ENST00000588679 2904 ntBASIC24.31■■□□□ 1.48
NINLQ9Y2I6 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
NINLQ9Y2I6 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC24.31■■□□□ 1.48
NINLQ9Y2I6 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC24.31■■□□□ 1.48
NINLQ9Y2I6 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
NINLQ9Y2I6 REXO1L9P-201ENST00000604264 2108 ntBASIC24.31■■□□□ 1.48
NINLQ9Y2I6 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms