Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGC3Q9UN70 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGC3Q9UN70 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
PCDHGC3Q9UN70 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHGC3Q9UN70 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDHGC3Q9UN70 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGC3Q9UN70 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
PCDHGC3Q9UN70 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PCDHGC3Q9UN70 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGC3Q9UN70 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGC3Q9UN70 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGC3Q9UN70 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGC3Q9UN70 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHGC3Q9UN70 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGC3Q9UN70 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGC3Q9UN70 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGC3Q9UN70 DRAXINP1-201ENST00000437611 948 ntBASIC18.84■□□□□ 0.61
PCDHGC3Q9UN70 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGC3Q9UN70 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHGC3Q9UN70 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHGC3Q9UN70 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.84■□□□□ 0.61
PCDHGC3Q9UN70 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGC3Q9UN70 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGC3Q9UN70 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGC3Q9UN70 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHGC3Q9UN70 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGC3Q9UN70 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGC3Q9UN70 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGC3Q9UN70 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.84■□□□□ 0.61
PCDHGC3Q9UN70 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGC3Q9UN70 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGC3Q9UN70 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGC3Q9UN70 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGC3Q9UN70 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.83■□□□□ 0.61
PCDHGC3Q9UN70 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHGC3Q9UN70 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
PCDHGC3Q9UN70 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHGC3Q9UN70 HLA-J-201ENST00000462773 1622 ntBASIC18.83■□□□□ 0.61
PCDHGC3Q9UN70 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.83■□□□□ 0.61
PCDHGC3Q9UN70 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PCDHGC3Q9UN70 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGC3Q9UN70 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGC3Q9UN70 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PCDHGC3Q9UN70 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGC3Q9UN70 AC005104.2-201ENST00000427818 678 ntBASIC18.83■□□□□ 0.6
PCDHGC3Q9UN70 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.83■□□□□ 0.6
PCDHGC3Q9UN70 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.83■□□□□ 0.6
PCDHGC3Q9UN70 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.83■□□□□ 0.6
PCDHGC3Q9UN70 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGC3Q9UN70 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.83■□□□□ 0.6
PCDHGC3Q9UN70 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGC3Q9UN70 AC010460.3-201ENST00000511359 1579 ntBASIC18.83■□□□□ 0.6
PCDHGC3Q9UN70 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
PCDHGC3Q9UN70 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.83■□□□□ 0.6
PCDHGC3Q9UN70 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGC3Q9UN70 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGC3Q9UN70 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGC3Q9UN70 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.83■□□□□ 0.6
PCDHGC3Q9UN70 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.83■□□□□ 0.6
PCDHGC3Q9UN70 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGC3Q9UN70 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
PCDHGC3Q9UN70 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
PCDHGC3Q9UN70 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHGC3Q9UN70 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDHGC3Q9UN70 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGC3Q9UN70 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGC3Q9UN70 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGC3Q9UN70 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGC3Q9UN70 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHGC3Q9UN70 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
PCDHGC3Q9UN70 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.82■□□□□ 0.6
PCDHGC3Q9UN70 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGC3Q9UN70 TPSP2-201ENST00000561760 610 ntBASIC18.82■□□□□ 0.6
PCDHGC3Q9UN70 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDHGC3Q9UN70 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.82■□□□□ 0.6
PCDHGC3Q9UN70 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHGC3Q9UN70 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHGC3Q9UN70 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.82■□□□□ 0.6
PCDHGC3Q9UN70 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDHGC3Q9UN70 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PCDHGC3Q9UN70 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGC3Q9UN70 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
PCDHGC3Q9UN70 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGC3Q9UN70 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHGC3Q9UN70 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGC3Q9UN70 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
PCDHGC3Q9UN70 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGC3Q9UN70 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGC3Q9UN70 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
PCDHGC3Q9UN70 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGC3Q9UN70 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGC3Q9UN70 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGC3Q9UN70 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDHGC3Q9UN70 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGC3Q9UN70 KRT18P1-202ENST00000452408 1331 ntBASIC18.81■□□□□ 0.6
PCDHGC3Q9UN70 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGC3Q9UN70 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGC3Q9UN70 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGC3Q9UN70 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGC3Q9UN70 COX5BP2-201ENST00000392354 334 ntBASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms