Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBQLN2Q9UHD9 NME6-213ENST00000451657 871 ntTSL 2 BASIC15.14■□□□□ 0.01
UBQLN2Q9UHD9 KRT18P6-201ENST00000555540 1265 ntBASIC15.14■□□□□ 0.01
UBQLN2Q9UHD9 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC15.14■□□□□ 0.01
UBQLN2Q9UHD9 AC083880.1-201ENST00000608266 535 ntBASIC15.14■□□□□ 0.01
UBQLN2Q9UHD9 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
UBQLN2Q9UHD9 MYC-208ENST00000641036 567 ntBASIC15.14■□□□□ 0.01
UBQLN2Q9UHD9 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBQLN2Q9UHD9 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.14■□□□□ 0.01
UBQLN2Q9UHD9 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
UBQLN2Q9UHD9 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
UBQLN2Q9UHD9 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBQLN2Q9UHD9 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
UBQLN2Q9UHD9 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBQLN2Q9UHD9 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBQLN2Q9UHD9 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC15.14■□□□□ 0.01
UBQLN2Q9UHD9 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
UBQLN2Q9UHD9 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBQLN2Q9UHD9 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.14■□□□□ 0.01
UBQLN2Q9UHD9 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.14■□□□□ 0.01
UBQLN2Q9UHD9 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBQLN2Q9UHD9 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBQLN2Q9UHD9 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
UBQLN2Q9UHD9 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
UBQLN2Q9UHD9 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.13■□□□□ 0.01
UBQLN2Q9UHD9 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBQLN2Q9UHD9 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
UBQLN2Q9UHD9 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.13■□□□□ 0.01
UBQLN2Q9UHD9 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBQLN2Q9UHD9 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBQLN2Q9UHD9 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBQLN2Q9UHD9 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBQLN2Q9UHD9 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBQLN2Q9UHD9 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
UBQLN2Q9UHD9 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
UBQLN2Q9UHD9 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.13■□□□□ 0.01
UBQLN2Q9UHD9 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
UBQLN2Q9UHD9 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
UBQLN2Q9UHD9 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBQLN2Q9UHD9 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
UBQLN2Q9UHD9 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC15.13■□□□□ 0.01
UBQLN2Q9UHD9 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
UBQLN2Q9UHD9 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBQLN2Q9UHD9 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
UBQLN2Q9UHD9 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
UBQLN2Q9UHD9 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
UBQLN2Q9UHD9 AC073210.2-201ENST00000430369 194 ntBASIC15.13■□□□□ 0.01
UBQLN2Q9UHD9 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
UBQLN2Q9UHD9 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC15.13■□□□□ 0.01
UBQLN2Q9UHD9 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC15.13■□□□□ 0.01
UBQLN2Q9UHD9 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
UBQLN2Q9UHD9 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC15.13■□□□□ 0.01
UBQLN2Q9UHD9 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.13■□□□□ 0.01
UBQLN2Q9UHD9 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBQLN2Q9UHD9 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
UBQLN2Q9UHD9 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBQLN2Q9UHD9 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC15.13■□□□□ 0.01
UBQLN2Q9UHD9 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBQLN2Q9UHD9 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBQLN2Q9UHD9 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBQLN2Q9UHD9 NXN-202ENST00000537628 1340 ntTSL 3 BASIC15.13■□□□□ 0.01
UBQLN2Q9UHD9 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBQLN2Q9UHD9 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
UBQLN2Q9UHD9 AC132872.4-202ENST00000622924 2756 ntBASIC15.13■□□□□ 0.01
UBQLN2Q9UHD9 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.13■□□□□ 0.01
UBQLN2Q9UHD9 AC022188.1-201ENST00000620960 1664 ntBASIC15.12■□□□□ 0.01
UBQLN2Q9UHD9 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBQLN2Q9UHD9 AC007950.2-201ENST00000615045 2347 ntBASIC15.12■□□□□ 0.01
UBQLN2Q9UHD9 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBQLN2Q9UHD9 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.12■□□□□ 0.01
UBQLN2Q9UHD9 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBQLN2Q9UHD9 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBQLN2Q9UHD9 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.12■□□□□ 0.01
UBQLN2Q9UHD9 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
UBQLN2Q9UHD9 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
UBQLN2Q9UHD9 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBQLN2Q9UHD9 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
UBQLN2Q9UHD9 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.12■□□□□ 0.01
UBQLN2Q9UHD9 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UBQLN2Q9UHD9 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.12■□□□□ 0.01
UBQLN2Q9UHD9 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBQLN2Q9UHD9 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBQLN2Q9UHD9 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UBQLN2Q9UHD9 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBQLN2Q9UHD9 CD99P1-205ENST00000527459 561 ntBASIC15.12■□□□□ 0.01
UBQLN2Q9UHD9 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC15.12■□□□□ 0.01
UBQLN2Q9UHD9 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC15.12■□□□□ 0.01
UBQLN2Q9UHD9 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC15.12■□□□□ 0.01
UBQLN2Q9UHD9 MYC-209ENST00000641252 345 ntBASIC15.12■□□□□ 0.01
UBQLN2Q9UHD9 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBQLN2Q9UHD9 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
UBQLN2Q9UHD9 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBQLN2Q9UHD9 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UBQLN2Q9UHD9 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
UBQLN2Q9UHD9 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBQLN2Q9UHD9 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
UBQLN2Q9UHD9 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.12■□□□□ 0.01
UBQLN2Q9UHD9 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC15.12■□□□□ 0.01
UBQLN2Q9UHD9 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBQLN2Q9UHD9 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms