Protein–RNA interactions for Protein: Q9UH90

FBXO40, F-box only protein 40, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO40Q9UH90 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.24■□□□□ 0.83
FBXO40Q9UH90 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.24■□□□□ 0.83
FBXO40Q9UH90 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.24■□□□□ 0.83
FBXO40Q9UH90 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
FBXO40Q9UH90 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.24■□□□□ 0.83
FBXO40Q9UH90 AL356488.2-201ENST00000602755 427 ntBASIC20.24■□□□□ 0.83
FBXO40Q9UH90 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
FBXO40Q9UH90 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
FBXO40Q9UH90 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
FBXO40Q9UH90 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FBXO40Q9UH90 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FBXO40Q9UH90 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FBXO40Q9UH90 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FBXO40Q9UH90 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
FBXO40Q9UH90 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
FBXO40Q9UH90 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
FBXO40Q9UH90 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
FBXO40Q9UH90 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.23■□□□□ 0.83
FBXO40Q9UH90 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FBXO40Q9UH90 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.23■□□□□ 0.83
FBXO40Q9UH90 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.23■□□□□ 0.83
FBXO40Q9UH90 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FBXO40Q9UH90 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
FBXO40Q9UH90 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FBXO40Q9UH90 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FBXO40Q9UH90 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.23■□□□□ 0.83
FBXO40Q9UH90 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.23■□□□□ 0.83
FBXO40Q9UH90 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.23■□□□□ 0.83
FBXO40Q9UH90 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
FBXO40Q9UH90 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
FBXO40Q9UH90 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
FBXO40Q9UH90 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
FBXO40Q9UH90 AL589182.2-201ENST00000619332 1049 ntBASIC20.23■□□□□ 0.83
FBXO40Q9UH90 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
FBXO40Q9UH90 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FBXO40Q9UH90 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.23■□□□□ 0.83
FBXO40Q9UH90 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.23■□□□□ 0.83
FBXO40Q9UH90 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.23■□□□□ 0.83
FBXO40Q9UH90 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.23■□□□□ 0.83
FBXO40Q9UH90 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
FBXO40Q9UH90 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.22■□□□□ 0.83
FBXO40Q9UH90 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
FBXO40Q9UH90 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.22■□□□□ 0.83
FBXO40Q9UH90 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.22■□□□□ 0.83
FBXO40Q9UH90 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FBXO40Q9UH90 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FBXO40Q9UH90 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
FBXO40Q9UH90 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.22■□□□□ 0.83
FBXO40Q9UH90 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.22■□□□□ 0.83
FBXO40Q9UH90 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.22■□□□□ 0.83
FBXO40Q9UH90 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FBXO40Q9UH90 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
FBXO40Q9UH90 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
FBXO40Q9UH90 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FBXO40Q9UH90 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.22■□□□□ 0.83
FBXO40Q9UH90 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.22■□□□□ 0.83
FBXO40Q9UH90 KRT18P3-201ENST00000451602 1288 ntBASIC20.22■□□□□ 0.83
FBXO40Q9UH90 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.22■□□□□ 0.83
FBXO40Q9UH90 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.22■□□□□ 0.83
FBXO40Q9UH90 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
FBXO40Q9UH90 AC005593.1-201ENST00000624894 515 ntBASIC20.22■□□□□ 0.83
FBXO40Q9UH90 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
FBXO40Q9UH90 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
FBXO40Q9UH90 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FBXO40Q9UH90 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
FBXO40Q9UH90 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
FBXO40Q9UH90 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
FBXO40Q9UH90 AL049757.1-201ENST00000616842 1596 ntBASIC20.21■□□□□ 0.83
FBXO40Q9UH90 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.21■□□□□ 0.83
FBXO40Q9UH90 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
FBXO40Q9UH90 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.21■□□□□ 0.83
FBXO40Q9UH90 TNXA-203ENST00000507684 2038 ntBASIC20.21■□□□□ 0.83
FBXO40Q9UH90 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
FBXO40Q9UH90 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FBXO40Q9UH90 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
FBXO40Q9UH90 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.21■□□□□ 0.83
FBXO40Q9UH90 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
FBXO40Q9UH90 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
FBXO40Q9UH90 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.21■□□□□ 0.83
FBXO40Q9UH90 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.21■□□□□ 0.83
FBXO40Q9UH90 AC093677.2-201ENST00000600169 1863 ntBASIC20.21■□□□□ 0.83
FBXO40Q9UH90 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
FBXO40Q9UH90 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FBXO40Q9UH90 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FBXO40Q9UH90 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.21■□□□□ 0.83
FBXO40Q9UH90 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FBXO40Q9UH90 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
FBXO40Q9UH90 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.21■□□□□ 0.83
FBXO40Q9UH90 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FBXO40Q9UH90 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
FBXO40Q9UH90 SIRPAP1-201ENST00000448467 1770 ntBASIC20.21■□□□□ 0.83
FBXO40Q9UH90 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FBXO40Q9UH90 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
FBXO40Q9UH90 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
FBXO40Q9UH90 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
FBXO40Q9UH90 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.21■□□□□ 0.83
FBXO40Q9UH90 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.21■□□□□ 0.83
FBXO40Q9UH90 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
FBXO40Q9UH90 AC004817.3-201ENST00000602957 2129 ntBASIC20.2■□□□□ 0.82
FBXO40Q9UH90 AC093503.3-201ENST00000624917 2352 ntBASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms