Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VAPAQ9P0L0 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
VAPAQ9P0L0 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VAPAQ9P0L0 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
VAPAQ9P0L0 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
VAPAQ9P0L0 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VAPAQ9P0L0 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VAPAQ9P0L0 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
VAPAQ9P0L0 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VAPAQ9P0L0 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
VAPAQ9P0L0 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
VAPAQ9P0L0 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VAPAQ9P0L0 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VAPAQ9P0L0 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VAPAQ9P0L0 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
VAPAQ9P0L0 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VAPAQ9P0L0 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.91■□□□□ 0.3
VAPAQ9P0L0 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.91■□□□□ 0.3
VAPAQ9P0L0 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.91■□□□□ 0.3
VAPAQ9P0L0 EGLN1P1-201ENST00000531623 762 ntBASIC16.91■□□□□ 0.3
VAPAQ9P0L0 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.91■□□□□ 0.3
VAPAQ9P0L0 MIR3917-201ENST00000580971 93 ntBASIC16.91■□□□□ 0.3
VAPAQ9P0L0 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VAPAQ9P0L0 AC008687.5-201ENST00000593746 558 ntBASIC16.91■□□□□ 0.3
VAPAQ9P0L0 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.91■□□□□ 0.3
VAPAQ9P0L0 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
VAPAQ9P0L0 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
VAPAQ9P0L0 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VAPAQ9P0L0 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VAPAQ9P0L0 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VAPAQ9P0L0 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VAPAQ9P0L0 AL121761.2-201ENST00000598007 1648 ntBASIC16.91■□□□□ 0.3
VAPAQ9P0L0 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
VAPAQ9P0L0 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VAPAQ9P0L0 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VAPAQ9P0L0 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VAPAQ9P0L0 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.91■□□□□ 0.3
VAPAQ9P0L0 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
VAPAQ9P0L0 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.9■□□□□ 0.3
VAPAQ9P0L0 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
VAPAQ9P0L0 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VAPAQ9P0L0 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VAPAQ9P0L0 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VAPAQ9P0L0 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VAPAQ9P0L0 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
VAPAQ9P0L0 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
VAPAQ9P0L0 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.9■□□□□ 0.3
VAPAQ9P0L0 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
VAPAQ9P0L0 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.9■□□□□ 0.3
VAPAQ9P0L0 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
VAPAQ9P0L0 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.9■□□□□ 0.3
VAPAQ9P0L0 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
VAPAQ9P0L0 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
VAPAQ9P0L0 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
VAPAQ9P0L0 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.9■□□□□ 0.3
VAPAQ9P0L0 AC008550.1-201ENST00000511500 884 ntBASIC16.9■□□□□ 0.3
VAPAQ9P0L0 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.9■□□□□ 0.3
VAPAQ9P0L0 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
VAPAQ9P0L0 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.9■□□□□ 0.3
VAPAQ9P0L0 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
VAPAQ9P0L0 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.9■□□□□ 0.3
VAPAQ9P0L0 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.9■□□□□ 0.3
VAPAQ9P0L0 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.9■□□□□ 0.3
VAPAQ9P0L0 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VAPAQ9P0L0 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.9■□□□□ 0.3
VAPAQ9P0L0 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.9■□□□□ 0.3
VAPAQ9P0L0 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VAPAQ9P0L0 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
VAPAQ9P0L0 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
VAPAQ9P0L0 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.9■□□□□ 0.3
VAPAQ9P0L0 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.9■□□□□ 0.3
VAPAQ9P0L0 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VAPAQ9P0L0 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.89■□□□□ 0.3
VAPAQ9P0L0 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
VAPAQ9P0L0 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
VAPAQ9P0L0 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
VAPAQ9P0L0 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VAPAQ9P0L0 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.89■□□□□ 0.29
VAPAQ9P0L0 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VAPAQ9P0L0 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VAPAQ9P0L0 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.89■□□□□ 0.29
VAPAQ9P0L0 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.89■□□□□ 0.29
VAPAQ9P0L0 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
VAPAQ9P0L0 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
VAPAQ9P0L0 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VAPAQ9P0L0 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
VAPAQ9P0L0 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VAPAQ9P0L0 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.89■□□□□ 0.29
VAPAQ9P0L0 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.89■□□□□ 0.29
VAPAQ9P0L0 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.89■□□□□ 0.29
VAPAQ9P0L0 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
VAPAQ9P0L0 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.89■□□□□ 0.29
VAPAQ9P0L0 AL355075.4-201ENST00000554988 638 ntBASIC16.89■□□□□ 0.29
VAPAQ9P0L0 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
VAPAQ9P0L0 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.89■□□□□ 0.29
VAPAQ9P0L0 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.89■□□□□ 0.29
VAPAQ9P0L0 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
VAPAQ9P0L0 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.89■□□□□ 0.29
VAPAQ9P0L0 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.89■□□□□ 0.29
VAPAQ9P0L0 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms