Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 AL023973.1-201ENST00000624619 620 ntBASIC16.68■□□□□ 0.26
RLIMQ9NVW2 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RLIMQ9NVW2 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RLIMQ9NVW2 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RLIMQ9NVW2 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RLIMQ9NVW2 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.68■□□□□ 0.26
RLIMQ9NVW2 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
RLIMQ9NVW2 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RLIMQ9NVW2 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RLIMQ9NVW2 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.68■□□□□ 0.26
RLIMQ9NVW2 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RLIMQ9NVW2 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RLIMQ9NVW2 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.67■□□□□ 0.26
RLIMQ9NVW2 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RLIMQ9NVW2 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
RLIMQ9NVW2 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RLIMQ9NVW2 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RLIMQ9NVW2 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.67■□□□□ 0.26
RLIMQ9NVW2 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RLIMQ9NVW2 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RLIMQ9NVW2 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RLIMQ9NVW2 AL355312.1-201ENST00000407115 2176 ntBASIC16.67■□□□□ 0.26
RLIMQ9NVW2 AP001094.4-201ENST00000579008 2176 ntBASIC16.67■□□□□ 0.26
RLIMQ9NVW2 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
RLIMQ9NVW2 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RLIMQ9NVW2 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RLIMQ9NVW2 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RLIMQ9NVW2 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
RLIMQ9NVW2 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RLIMQ9NVW2 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RLIMQ9NVW2 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RLIMQ9NVW2 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
RLIMQ9NVW2 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.67■□□□□ 0.26
RLIMQ9NVW2 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.67■□□□□ 0.26
RLIMQ9NVW2 AP000523.1-201ENST00000398242 1049 ntBASIC16.67■□□□□ 0.26
RLIMQ9NVW2 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.67■□□□□ 0.26
RLIMQ9NVW2 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.67■□□□□ 0.26
RLIMQ9NVW2 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RLIMQ9NVW2 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.67■□□□□ 0.26
RLIMQ9NVW2 AC133561.5-201ENST00000635547 218 ntBASIC16.67■□□□□ 0.26
RLIMQ9NVW2 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RLIMQ9NVW2 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RLIMQ9NVW2 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RLIMQ9NVW2 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RLIMQ9NVW2 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RLIMQ9NVW2 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RLIMQ9NVW2 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RLIMQ9NVW2 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
RLIMQ9NVW2 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RLIMQ9NVW2 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RLIMQ9NVW2 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RLIMQ9NVW2 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RLIMQ9NVW2 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RLIMQ9NVW2 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
RLIMQ9NVW2 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RLIMQ9NVW2 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RLIMQ9NVW2 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RLIMQ9NVW2 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.66■□□□□ 0.26
RLIMQ9NVW2 AC100803.2-201ENST00000562459 1963 ntBASIC16.66■□□□□ 0.26
RLIMQ9NVW2 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RLIMQ9NVW2 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RLIMQ9NVW2 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RLIMQ9NVW2 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.66■□□□□ 0.26
RLIMQ9NVW2 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.66■□□□□ 0.26
RLIMQ9NVW2 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RLIMQ9NVW2 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RLIMQ9NVW2 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RLIMQ9NVW2 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RLIMQ9NVW2 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RLIMQ9NVW2 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.66■□□□□ 0.26
RLIMQ9NVW2 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.66■□□□□ 0.26
RLIMQ9NVW2 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
RLIMQ9NVW2 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
RLIMQ9NVW2 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RLIMQ9NVW2 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
RLIMQ9NVW2 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.66■□□□□ 0.26
RLIMQ9NVW2 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RLIMQ9NVW2 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RLIMQ9NVW2 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.66■□□□□ 0.26
RLIMQ9NVW2 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RLIMQ9NVW2 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RLIMQ9NVW2 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RLIMQ9NVW2 AC124067.4-201ENST00000519691 2379 ntBASIC16.65■□□□□ 0.26
RLIMQ9NVW2 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RLIMQ9NVW2 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.65■□□□□ 0.26
RLIMQ9NVW2 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RLIMQ9NVW2 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RLIMQ9NVW2 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RLIMQ9NVW2 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
RLIMQ9NVW2 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RLIMQ9NVW2 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RLIMQ9NVW2 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
RLIMQ9NVW2 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RLIMQ9NVW2 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
RLIMQ9NVW2 LIN28AP1-201ENST00000429574 405 ntBASIC16.65■□□□□ 0.26
RLIMQ9NVW2 PVRIG2P-201ENST00000435460 978 ntBASIC16.65■□□□□ 0.26
RLIMQ9NVW2 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.65■□□□□ 0.26
RLIMQ9NVW2 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RLIMQ9NVW2 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RLIMQ9NVW2 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms